Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211786g00003 ATGACTCTTAAGCTTGGTAACATAACCACCATAGTTATTTCATCTCCACAATTAGCAAAAGAAGTTCTCCATAAACACGACCAAACCTTCTGTGATAGACAAACCCCGGATACTCTTACGGCATTGGATCACCATAAAGTGTCGGTGATATGGTTGCCGTCGAGAAATAAATGGAGGAAACTTAGGAGAGTTTGCGCGGATAATCTGTTCTCGGTCAAAAAACTTGATTCTACGCAAGTTCTTCGTCAAAAGAAAATCCAAGATTTGATGAACTTTGTGAAAGAAAGAAGCGAAAAGGGCGAATCTTTAGATATGGGTAATGCTGCTTTCGTAACCGTGCTTAATTCCATATCAAACACTTTCTTCTCTGTAGATTTGGCTCATTACAATTCCTTGAAGTCTCAAGAGTTCAAGGACACCATTTGGGGCATTATGGAAGAAATTGGAAGGCCTAATGTTGTGGACTTCTTTCCAATCATGAGGATGCTTGATCCACAAGGTACACGTGCAAGAATGAAAAGCTATTTTGAAAAGTTAATTAACTTTTTTGATGGCCTTGTAGAAGAAAGAATTCAAAGAAGAGCTTTGGAAGTAGAATCAAATGGAAGGAAAGACTTGCTAGATTCTTTGATAGATCTCATGTTGGAAGATAATTCAGAATTGAGCCGATCTCAAGTGCTACATTTATTAATGGATTTATTTAATGCTGGAATAGACACAACAAGTAGTATGATAGAATGGGCAATGGCAGAACTTGTACGTAATCCAAAAGTATTAAGAAAAGTTAGAGAAGAGCTTCATCAAGTTCTTGGCAAAGAACAACAACAAATTGAAGAATCACATATTTCAAAGCTTCCATTTCTAAGAGCAGTGGTGAAAGAAACGTTTCGGTTGCACCCACCAGCACCATTGCTACTACCACACAAATCAACATCACAAGAGGACATTGAACTATGTGGTTTCATGGTGCCCAAAAATGCACAAGTTTGGGTTAATGTATGGGGCATGGGAAGAGATTCAAGTATTTGGACAAACCCTAATGAATTCATGCCTCAAAGATTCTTGGATAATATTAATAATATTGATTTTAGAGGTAATGATTTTGAATTAATCCCCTTTGGAGCTGGAAGAAGAATTTGTCCTGAATTGCCATTGGCTTCTAGAAGTGTTCATATTGTGTTGGCTTCTCTTCTATATGGATATGATTGGAAACTCCCAAGTAAATTGGAGGGTGAGGGTATTGATATGTCTGAAAAATTTGGGATTACCTTACACAAGGCCCAACCTCTCCAAATTATTCCCATAAAAACATAA 1314 0.3737 MTLKLGNITTIVISSPQLAKEVLHKHDQTFCDRQTPDTLTALDHHKVSVIWLPSRNKWRKLRRVCADNLFSVKKLDSTQVLRQKKIQDLMNFVKERSEKGESLDMGNAAFVTVLNSISNTFFSVDLAHYNSLKSQEFKDTIWGIMEEIGRPNVVDFFPIMRMLDPQGTRARMKSYFEKLINFFDGLVEERIQRRALEVESNGRKDLLDSLIDLMLEDNSELSRSQVLHLLMDLFNAGIDTTSSMIEWAMAELVRNPKVLRKVREELHQVLGKEQQQIEESHISKLPFLRAVVKETFRLHPPAPLLLPHKSTSQEDIELCGFMVPKNAQVWVNVWGMGRDSSIWTNPNEFMPQRFLDNINNIDFRGNDFELIPFGAGRRICPELPLASRSVHIVLASLLYGYDWKLPSKLEGEGIDMSEKFGITLHKAQPLQIIPIKT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211786g00003 437 SUPERFAMILY Cytochrome P450 2 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 Pfam Cytochrome P450 1 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 Gene3D Cytochrome P450 1 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 FunFam Cytochrome P450 76C4 1 433 - -
Stsc211786g00003 437 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00003 437 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 436 - -
Stsc211786g00003 437 CDD CYP76-like 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211786g00003 Stsc-Chr211786 13832 16006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211786g00003 1 436 Cytochrome P450 AT2G45570 48.526 1.18e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211786g00003 - - gmx:100809483 605.134