Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211786g00002 ATGGACTACCTTCCATTGCTTCTTCTAATGTCTTTTGTATGGGTAAGCATTCATGTTCTAATCTCAAACTTAGTCGCAAAAAAATCACCAAAATCACTCAAACTTCCACCAGGGCCTAAACCTTTTCCAATCATAGGAAACATCTTAGAATTTGGCAACCAACCTCATCAAGCACTTGCTAAGCTTTCTAAAACCTATGGACCCATAATGACTATGAAGCTTGGTAACATAACCACCATAGTCATTTCATCTCCACAATTAGCCAAAGAAGTTCTCCATAAATATGACCAAATCTTCTCCTACAGGACTATCCCTGACTCTGTTACAGCACTTGACCACCACAAATTTTCAATTGTATGGTTGCCCCCAACATCAACTCAATGGAGGAGTCTTAGGAAATTTTGTGCGACCAAAGTGTTCTCGACACAAAACCTAGACTCGACGCAGGATCTTCGACAAGAAAAGGTTCGTGAATTACTGGATTTCGTGAAGGAAAATGGTAAAAAGGGAGAAGTTTTGGATATCAGCGAGGTTTGTTTTACGACCGTACTTAATTCTGTATCGAACACTTTTTTCTCTATGAATCTAGCTCATTACACTTCCCAAAAATCACAAGAATTCAAAGATATCGTTTGGGGTGTTATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTTCCAATCTTTCGGTTTCTTGATCCGCAAGGTGCACGCACAAGAATGAGAGTTTACTTTGGAAAATTACTTAGCTTTTTGGATGGTGTTTTAGAAGAAAGATTGCAATCAAGAAAAGAGTTGGGAATGGGATCCAAGGATTGCAAAGATGTGTTAGATTCTGCGGCAGATATCCTTTTGGAAGGCGATTCACAAATTACCAGATCCCATTTGCTAAATTTATTTCTGGATTTATTTGTGGCCGGAATAGACACAACATCAAGCACAATAGAGTGGGCAATGGCAGAATTACTCCGTAACCCTAAAAACATAGTAAAAGTTAGAGAAGAACTTGGACAAGTCCTTGGCAAAGGTGAACAACAAAAACTTGAAGAATCACATATTTCACAGCTTCCTTTCCTAAGAGCAATTGTTAAGGAAACCCTACGTTTGCATCCACCAGCCCCATTTTTAGTTCCTCACAGGTCAGAAAATGATGTTGAAGTATGTGGCTACTTGGTTCCAAAAAATGCTCAAATCCTAATAAATGTATGGGCTATGGGAAGAGATTCAAGTGTTTGGAAAAACCCTAATGAATTCATGCCTGAAAGATTCTTGAAAAGTGAAATTGATTTTAAGGGACAAGATTTTGAGCTAATTCCGTTTGGTGCCGGAAGAAGAATTTGTCCTGGATTATCATTAGGGTTTAGGAGTATACACTTTGTGTTAGCTTCCCTTTTATTTGAATATGATTGGAAGCTCCCAAATGAGGTGAATCCAGAAGAGATGGACATGTCTGAGAAATATGGAATTACTTTACACAAGGCACAGCCTCTCCAAGTTATTCCTATTTCCATGCATAACAATAATATGAAGTGA 1536 0.3848 MDYLPLLLLMSFVWVSIHVLISNLVAKKSPKSLKLPPGPKPFPIIGNILEFGNQPHQALAKLSKTYGPIMTMKLGNITTIVISSPQLAKEVLHKYDQIFSYRTIPDSVTALDHHKFSIVWLPPTSTQWRSLRKFCATKVFSTQNLDSTQDLRQEKVRELLDFVKENGKKGEVLDISEVCFTTVLNSVSNTFFSMNLAHYTSQKSQEFKDIVWGVMEEAGRPNVVDFFPIFRFLDPQGARTRMRVYFGKLLSFLDGVLEERLQSRKELGMGSKDCKDVLDSAADILLEGDSQITRSHLLNLFLDLFVAGIDTTSSTIEWAMAELLRNPKNIVKVREELGQVLGKGEQQKLEESHISQLPFLRAIVKETLRLHPPAPFLVPHRSENDVEVCGYLVPKNAQILINVWAMGRDSSVWKNPNEFMPERFLKSEIDFKGQDFELIPFGAGRRICPGLSLGFRSIHFVLASLLFEYDWKLPNEVNPEEMDMSEKYGITLHKAQPLQVIPISMHNNNMK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211786g00002 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 503 - -
Stsc211786g00002 511 CDD CYP76-like 63 502 - -
Stsc211786g00002 511 SUPERFAMILY Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Stsc211786g00002 511 Gene3D Cytochrome P450 21 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211786g00002 511 FunFam Cytochrome P450 76C4 27 501 - -
Stsc211786g00002 511 Pfam Cytochrome P450 36 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211786g00002 Stsc-Chr211786 8508 11416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211786g00002 8 509 Cytochrome P450 AT2G45550 48.915 4.23e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211786g00002 - - gmx:100809483 710.294