Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211785g00004 ATGATGCATGATCAGAGAAAAAAGTCCTCTGTAGATGTAGACTTCTTTACTGAGTATGGTGAAGGGAGTAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATAAATGATATATTTGAACATGTCTCCGATGCCACTCGCATTCTTCGGGAGATCAAGCTTCTTAGGCTCTTACGCCATCCTGATATTGTGGAGATTAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAGGATATATATGTTGTTTTCGAACTAATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCGAGAACATTACCAGTTTTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCGAAAAACATTTTAGCAAATGCTGACTGCAAATTGAAGATTTGTGACTTTGGTCTTGCTAGAGTGGCTTTCAATGATACACCAACTGCTATATTCTGGACTGATTATGTTGCTACAAGGTGGTATAGAGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCAATAGACATATGGAGTATTGGCTGCATTTTTGCTGAACTATTAACCGGAAAACCTCTTTTCCCGGGGAAGAATGTTGTCCATCAATTGGACCTAATGACTGATTTTCTCGGAACACCATCTCCTGAAGCCATTGCTAGGGTAAGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAGGAAGAAACCAGTTCCGTTCTCCCATAAGTTTCCTAACGCAGACCCCCTTGCCCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGATGAGGCTCTAGCTGATCCATATTTCAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTTCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAAGATGTTCGAGAACTCATATACCGAGAGGCTTTGGAGTACCATCCAAAAATGTTAAAGGAACATCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCGAGTGCTGTTGACCACTTCAAGAAGCAATTTGCATATCTCGAGGAGCATTATGGAAAAGGTGGAACTGTTACTCCACCTGAAAGGCAACATGCATCATTACCCAGGCCATGTGTGTTATATTCAGATAAGTCGAGACCGAATGTAGCTGAAGTTGCAGAAGATCTCTCCAAGTGCAACATCAAAGAAAATGAGAAGCCAGCCATAGATAGGAATGGGGTTATCCCTTTGACCAAGCCTCCTTTACATGCTCCTCAAAATATTCAAGGCATAGCTGCCCGGCATGGGAGAGTTGCTGGTTCAGCGTTGAATTACAACAACTGTGGAGTAGCAGTGACAGCAGAGGCTGCTCAGCGGAGGATGATTCGAAATCCACCTGTGTCGACACAATATGCTGCTTCAAGCTGTTCATATCCTAGAAGAAACCCGAGCTGTAAAACTGAAAGACCAGAAGACAATGGCATTGAAGGTTCCAACGGGCTTCAACCAAAGCCTCAATACATGGCGCGAAAAGTTGCTGCCGCTCAAGGTGGAGCTGGTGGTCATTGGTAG 1686 0.4276 MMHDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRRKKPVPFSHKFPNADPLALRLLERMLAFEPKDRPTADEALADPYFKGLAKVEREPSSQPVTKMEFEFERRRITKEDVRELIYREALEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRPCVLYSDKSRPNVAEVAEDLSKCNIKENEKPAIDRNGVIPLTKPPLHAPQNIQGIAARHGRVAGSALNYNNCGVAVTAEAAQRRMIRNPPVSTQYAASSCSYPRRNPSCKTERPEDNGIEGSNGLQPKPQYMARKVAAAQGGAGGHW 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211785g00004 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 360 - -
Stsc211785g00004 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Stsc211785g00004 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Stsc211785g00004 561 FunFam Mitogen-activated protein kinase 15 118 - -
Stsc211785g00004 561 FunFam Mitogen-activated protein kinase 111 339 - -
Stsc211785g00004 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Stsc211785g00004 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211785g00004 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211785g00004 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211785g00004 561 CDD STKc_TDY_MAPK 24 361 - -
Stsc211785g00004 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Stsc211785g00004 561 MobiDBLite consensus disorder prediction 508 543 - -
Stsc211785g00004 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211785g00004 Stsc-Chr211785 26036 29984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211785g00004 1 561 MAP Kinase Gene Family AT5G19010 78.709 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc211785g00004 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211785g00004 - - qsa:O6P43_021642 1023.46