Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211782g00003 ATGACGGAAGCGGGGCCAGTGCTTTCTATGTGCTTGGCCTTTGCAAAGGAACCTTTTGAGGTGAAATCGGGTGCGTGCGGGACCGTCGTAAGAAACGCTCAGATGAAGATTATTGACCCTCTCACTTCTGCTTCCCTTCCCAGAAACCATGCCGGTGAGATTTGCATTAGAGGCAACCAAATCATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGGTACCATAGACAAAGAGAGATGGTTGCACACCGGTGACATAGGATACATCGATGACAACGATGAGCTATTCATCGTTGATCGGTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTTGCTCCTGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACATTTCCGATGCAGCTGTTATAGCTATGAAAGATGAGGCAGCAGGAGAGGTTCCAGTTGCATTTGTTGTAAGATCAAACGCTTCTAACATATCGGAGGATGATATCAAACTATACATCTCAAAGCAGGTTGTGTTTTACAAGAGAATCAACAAAGTTTTCTTTGTGGATTCAATCCCAAAGGCACCGTCAGGTAAGATTTTGCGAAAAGCTTTCGTCTAA 600 0.44 MTEAGPVLSMCLAFAKEPFEVKSGACGTVVRNAQMKIIDPLTSASLPRNHAGEICIRGNQIMKGYLNDPKATEGTIDKERWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNISDAAVIAMKDEAAGEVPVAFVVRSNASNISEDDIKLYISKQVVFYKRINKVFFVDSIPKAPSGKILRKAFV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211782g00003 199 Pfam AMP-binding enzyme C-terminal domain 117 192 IPR025110 -
Stsc211782g00003 199 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 197 - -
Stsc211782g00003 199 Pfam AMP-binding enzyme 1 108 IPR000873 -
Stsc211782g00003 199 Gene3D - 104 199 IPR045851 -
Stsc211782g00003 199 FunFam 4-coumarate--CoA ligase 2 104 199 - -
Stsc211782g00003 199 SUPERFAMILY Acetyl-CoA synthetase-like 1 197 - -
Stsc211782g00003 199 Gene3D - 1 103 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211782g00003 Stsc-Chr211782 5152 6506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211782g00003 1 170 Monolignol Biosynthesis Gene Families AT1G51680 78.235 1.07e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211782g00003 K01904 - qsa:O6P43_022302 352.058