Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211782g00002 ATGGAAGAACCGTTAAGAAGCGGTGATCATCACGGCGGTGAGCATGATGACTTCATTTTCCGTTCCAAGCTCCCTCACATTTACATCCCAGACCACCTCCCTCTCCACACTTACTGCTTCCAGAATCTCTCCCGCTTCAAGGACCGTCCATGCCTCATCAACGCCACCACTGGCGAAACCTTCACATACGCCGCCGTCCAACTCACCGCCAGAAAAGTTGCCGCTGGCCTCAACAACCTCGGTATCCGTCAAGGCGACGTCATCCTCCTCCTCCTCCACAACTGCCACCAGTTTGTCTTCGCTTTCCTCGGCGGCTCCTACCGTGGCGCCATCGTCACCACCGCCAACCCCTTCTACACCCCCCCCGAGGTCGCCAAGCAGGCCACCGCCTCCGGCGCTAAGCTCATCATAACTCAGTCGACCTACGTAGACAAGGTCAAAGATCTGGCAACGGAGAAACACATGAAGGTGGTGTGCATCGACTCGCCGCCGCAGGGTTGCCTTCACTTCTCGGAGCTAACGGAGGCGGACGAGGGAAACATCCCTGCGGTGAAAATCTCCCCGGAAGATGTAGTTGCACTGCCGTATTCTTCCGGCACGACGGGGCTCCCAAAAGGAGTGATGCTAACACACAAAGGGCTAGTGACGAGCGTGGCGCAGCAGGTGGACGGAGAGAACCCCAATCTGTACATTGACGAGAACGATGTGGTGGTTTGCGTGCTTCCGCTGTTCCACATTTACTCGCTGAATTCTGTTCTGCTGTGTGGGCTTCGAGTTGGGGCTGCAATAGTGATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTGAAGCGGTTGAGAAGCACAGGGTGAGCGTGGCGCCATTGGTGCCGCCGATCGTTCTGGCAATAGTGAAGAGCGGGGAGGTGGGACGGTACGATTTATCCTCGATTCGGATGGTGATGTCTGGTGCCGCTCCATTGGGAAAGGACCTTGAGGATGCTTTGAGGGCCAACCTCCCTAATGCTACCTTCGGACAGGTCTGA 1023 0.565 MEEPLRSGDHHGGEHDDFIFRSKLPHIYIPDHLPLHTYCFQNLSRFKDRPCLINATTGETFTYAAVQLTARKVAAGLNNLGIRQGDVILLLLHNCHQFVFAFLGGSYRGAIVTTANPFYTPPEVAKQATASGAKLIITQSTYVDKVKDLATEKHMKVVCIDSPPQGCLHFSELTEADEGNIPAVKISPEDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIDENDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLEAVEKHRVSVAPLVPPIVLAIVKSGEVGRYDLSSIRMVMSGAAPLGKDLEDALRANLPNATFGQV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211782g00002 340 Pfam AMP-binding enzyme 42 334 IPR000873 -
Stsc211782g00002 340 Gene3D - 11 340 IPR042099 -
Stsc211782g00002 340 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 338 - -
Stsc211782g00002 340 SUPERFAMILY Acetyl-CoA synthetase-like 19 336 - -
Stsc211782g00002 340 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211782g00002 Stsc-Chr211782 3570 4642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211782g00002 10 339 Monolignol Biosynthesis Gene Families AT1G51680 62.242 4.55e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211782g00002 K01904 - gmx:100779668 524.242