Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211780g00006 ATGGATTCTCTACTCTTTGACTTTCGAACACTCCTCTGCTTTTTCCTCTTCATCCTTGTAGCATTTAAACTAAGGAAGAATCTCAATCAAATTAACTCAACCTCAAAAATAGCCCCGGCGCCATGGAAGCTACCTATCTTAGGAGACATACACCATCTTGCAACATCCACACCACATCGAAAATTACGAGACTTGTCCAAAATACATGGACCTTTGATGCATCTACAGCTTGGAGAGATTTTCACCATTGTTGTTTCCTCAGCAGAGTATGCCAAGGAGGTAATGAAAACACATGACATCATCTTCGCATCAAGGCCTCAGATTCTAGCTGCAAAGGTTATATCATATGATTGCACAAGCATAGCCTTAGCACCTTATGGAAACTACTGGAGACAGCTAAAGAAGATTTGCACGTTGGAGCTTTTCACTTCAAAGCGTGTTGATTCATTTCGGCCAATAAGAGAAGAAGAGTTCACTAGTCTTATCAAAAGGATTATTGTTGTGGCGAACAATAATAATGGATCCCCTGTTAATCTCACTCAAGAGGTGTTTTCAACTATATACACCATCACTTCGAGGGCCGCGTTTGGCATGAAATTCAAAGACCAAGAAAGATTCATATCGCTGGCAAAAGAATTGGCGAAGGTGGGGACTGGTTTTTCTTTAGGAGATTTTTTTCCTTCAGCTAAATGGCTTCAACTTGTCTCTGGCTTGAGGCCTAAGATTGAGAAGTTGCATGGACAAACAGATCAGATACTGCAAAACATCATCAATGAACATAAAGTGGCAAAGTCATCAAAATCGAAGGAAGGACAAGGTGAAGTTGAAGGTCTTCTAGATGTTCTCTTAAGATTTGAGGATGGTAGTGGATCAAACCAAGATTTCTCCTTATCTAGTAACAATATCAAGACTATAATCTTGATTAACATCACCAATAATTCGTTTTTAAGAATATCTTTGGTGCTGGTAACAGCAACTACAATAGATTGGGCAATGGCAGAAATGATAAAGGATCCAACAATAATGAACAAAGCACAAGATGAGGTGAGAGAAAACTTCAATAAGAAAGGAAGGGTTGATGAAACTTGCCTCTATAAACTCAAATATTTGAAATCAGTGGTCAAAGAGACCCTTAGGTTACACCCTCCAGTTCCTCTTCTGCTGCCAAGAGAATGCAGATCCGCATGCAAAATAAATGGCTATTACATTCCATTTGGTGCCGGAAAAAGAATGTGTCCTGGCACCGCATTAGGCGTGATAAATGTTGAACTTGCCCTCGCATATTTATTGTATCACTTTGATTGGAAGCATCCCAGTGAAATGAGAATGGAGGAATTGGACATGACTGAGGCACTTGGAGTGACTGTCAGAAGAAAAGATGACCTGCAATTGGTTCCCATTGGTTCTCATCCTTTGCTTGAAGCATAA 1428 0.3999 MDSLLFDFRTLLCFFLFILVAFKLRKNLNQINSTSKIAPAPWKLPILGDIHHLATSTPHRKLRDLSKIHGPLMHLQLGEIFTIVVSSAEYAKEVMKTHDIIFASRPQILAAKVISYDCTSIALAPYGNYWRQLKKICTLELFTSKRVDSFRPIREEEFTSLIKRIIVVANNNNGSPVNLTQEVFSTIYTITSRAAFGMKFKDQERFISLAKELAKVGTGFSLGDFFPSAKWLQLVSGLRPKIEKLHGQTDQILQNIINEHKVAKSSKSKEGQGEVEGLLDVLLRFEDGSGSNQDFSLSSNNIKTIILINITNNSFLRISLVLVTATTIDWAMAEMIKDPTIMNKAQDEVRENFNKKGRVDETCLYKLKYLKSVVKETLRLHPPVPLLLPRECRSACKINGYYIPFGAGKRMCPGTALGVINVELALAYLLYHFDWKHPSEMRMEELDMTEALGVTVRRKDDLQLVPIGSHPLLEA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211780g00006 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Stsc211780g00006 475 SUPERFAMILY Cytochrome P450 38 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 Gene3D Cytochrome P450 402 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 PANTHER CYTOCHROME P450 71B11-RELATED 402 467 - -
Stsc211780g00006 475 Gene3D Cytochrome P450 31 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 Pfam Cytochrome P450 40 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211780g00006 475 Pfam Cytochrome P450 401 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211780g00006 Stsc-Chr211780 21266 24076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211780g00006 12 466 Cytochrome P450 AT3G26300 35.375 1.03e-96 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211780g00006 - - gmx:100801936 562.762