Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc211780g00003 | ATGGATTCTCAAATATTTAACTTCCTTGCTTTCATCTTCTTTCTCTTCTTCATCATTGCTGCATTCAGAATCCGAAAGAAAACTGATCCAATTCCAAATATACCCCCAGGGCCATGGAAGCTACCTATCATAGGAAACATACCAAATCTTGTTACATCCACACCACATAGAAAACTAAGAGATTTGGCAAACAAGTATGGACCATTGATGCACCTTCAACTTGGTGAAGTGTCTACCATTGTTGTTTCCTCAGCTGAGTATGCTAAAGAGGTTATGAAGACACATGACATCATCTTTGCTTCAAGGCCTGCAATTCTAGCAGCAAAGATAATTTCATATGATTGCACAAACATTGGTTTTGCACCATATGGAAATTATTGGAGGCAGTTAAGGAAGATTTGCACGTTGGAGCTTTTCAGCACGAAACGAGTCAATTCGTTCCGGCCGATACGAGAAGAAGAGTTCACCAATCTAGTTAAAAGGATTATGTCCTCAAAGGAAGGATCAGTTAACCTCACTGAAGAAGTGCTTTCGTCGATATATGGAATCGTTTCGAGGTCTGCTTTTGGTGGCACCAAACGTGAAGATCAAGAAAAGTTCATATCGCTTGTGCAACAAGCAACAATGGTTGCAGGGGGTTTTGATGTAGGAGATCTGTTTCCTTCTTGGAAATGGCTTCAACTTGTGAGTGGGTTGAGGCCTAAGCTTGAGAGTTTCCAAAGACAAATTGATCAGATATTGGAAAACATTGTTAGTGATCACAAAAAGGCAAAGTTGGAAGGTAAAGAAGGCGAAAAAAGTTATGAATCAGATGAAGATCTTGTGGATGTTCTCCTTCAATTTGAAGATGGTACCAATCAAGATATTTGCTTAAGCAGAAACAATATCAAGGCTATACTTGTGGATATCTTTGGCGGAGGAAGTGAGACATCGGCGCATACCATAGATTGGGCAATGATAGAGATGATAAAGGATCCAAGAGTAATGCAGAAAGCACAAGCTGAGGTTAGAGAGTTATTCAACAGTATAGGAAAGGTTGATGAGACTCTCATCAATGAACTCAAGTATTTGAAATCAGTTGTGAAAGAGACACTAAGGTTACACCCTCCGGCTCCTCTTTTACTTCCAAGAGAATGTGGAGAAGTGTGTGAGATCAATGGATATCACATTCCCTACAAAAGTAAGGTCATAGTGAATGCTTGGGCAATCGGAAGAGATCCAAAAAACTGGAGCGAACCAGAGAAGTTTTATCCGGAGAGGTTCACTGATAGTTCCATAGACTACAAAGGGAATAATTTCGAGTACATACCGTTTGGTGCTGGAAGAAGAACGTGCCCCGGCAGCACATTAGGATTGTTGAATGTTGAGCTGGCGCTCGCATATTTATTATATCACTTTGATTGGAAGCTTCCAAATGGAATGAAACCTGAGGAAATGGACATGTCTGAGGCATTTGGAATGACTGTTAGAAGAAAAAATGACCTGCAATTGATTCCCACTGTTTTTGGTCCTTTGCTTGAAACATAA | 1527 | 0.4028 | MDSQIFNFLAFIFFLFFIIAAFRIRKKTDPIPNIPPGPWKLPIIGNIPNLVTSTPHRKLRDLANKYGPLMHLQLGEVSTIVVSSAEYAKEVMKTHDIIFASRPAILAAKIISYDCTNIGFAPYGNYWRQLRKICTLELFSTKRVNSFRPIREEEFTNLVKRIMSSKEGSVNLTEEVLSSIYGIVSRSAFGGTKREDQEKFISLVQQATMVAGGFDVGDLFPSWKWLQLVSGLRPKLESFQRQIDQILENIVSDHKKAKLEGKEGEKSYESDEDLVDVLLQFEDGTNQDICLSRNNIKAILVDIFGGGSETSAHTIDWAMIEMIKDPRVMQKAQAEVRELFNSIGKVDETLINELKYLKSVVKETLRLHPPAPLLLPRECGEVCEINGYHIPYKSKVIVNAWAIGRDPKNWSEPEKFYPERFTDSSIDYKGNNFEYIPFGAGRRTCPGSTLGLLNVELALAYLLYHFDWKLPNGMKPEEMDMSEAFGMTVRRKNDLQLIPTVFGPLLET | 508 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | CDD | CYP71-like | 65 | 495 | - | - | |
| Stsc211780g00003 | 508 | FunFam | Cytochrome P450 71D8 | 27 | 499 | - | - | |
| Stsc211780g00003 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506|GO:0016705 | |
| Stsc211780g00003 | 508 | PANTHER | OS08G0105600 PROTEIN | 58 | 502 | - | - | |
| Stsc211780g00003 | 508 | Pfam | Cytochrome P450 | 35 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | Gene3D | Cytochrome P450 | 30 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211780g00003 | 508 | SUPERFAMILY | Cytochrome P450 | 35 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc211780g00003 | Stsc-Chr211780 | 10979 | 12864 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc211780g00003 | 8 | 502 | Cytochrome P450 | AT3G26300 | 43.452 | 4.78e-142 | 416 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc211780g00003 | - | - | gmx:102665189 | 696.041 |