Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211771g00009 | ATGCCAGCGGGTATTATGATTCCGGCGAGAAACATGATGTCATCGATGATCGGAAGGAACAACAACCTTGGTGGTGGGTTTGGATCTTCCTCTTCCTCTGGACTCTCTCTTGGCCAGATTGAGAACCACAACAAGGGTTCGGAGACACATCAAAGATCCATGGATATGTTTCAAGCTAACATGATGGAAGGTGCTCAATTGCACCACCACGGTCTCGACATGGCTCAGAACACGCCGGACAGCGACATCCCTAGAATCCGTGAGGACGATTTCGACAGCGCCACCAAGTCCGGCAGCGAGAACCAAGAAGGTGGGGCCTCCGGCGAGGACCAAGACCCCCGCCCTAACAAGAAGAAGCGCTACCACCGCCATACCCAGCACCAGATCCAGGAAATGGAAGCATTCTTTAAGGAGTGTCCGCACCCAGATGACAAGCAAAGGAAGGAGCTTAGCCGTGAGTTAGGGTTAGAGCCATTGCAGGTGAAGTTTTGGTTCCAGAACAAGCGCACTCAGATGAAGACGCAACATGAGAGGCACGAGAACACGCAGCTAAGGACAGAGAACGAGAAGCTGAGAGCGGATAACATGAGGTATAGGGAGGCTCTTAGCAATGCCTCTTGTCCCAACTGCGGTGGACCTACCGCCATTGGAGAAATGTCTTTTGATGAACATCACTTGAGGCTTGAAAATGCCAGGCTAAGGGAAGAGATAGATAGGATTTCTGCCATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTACCCACTCCTTTCATCCTCATCAGTTCCAACTCGTCCGCTAGAACTCGGCATTGGTGGTTTCGGTGGGCAATCGGGCATGGGTGGCGGCGACATGTACGGAGGAGGTGGAGCGGGAGATCTTCTGAGGCCAATGAGTGGGCCCTCTGAAGCAGACAAGCCAATGATAATAGAGCTGGCAGTAGCGGCCATGGAGGAGCTAATTGGGATGGCACAGATGGGTGAGCCTCTCTGGCTAACCACAATTGATGGTGCCACCACTGTGCTTAACGAGGATGAATATGTGAGATCCTTCCCCCGTGGAATTGGACCCAAACCTAATGGATTCAAGTGTGAAGCTTCACGTGAAACCGCTGTTGTCATCATGAACCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAATCTTCTCCGGAATAGTTTCAAGAGCGGCGACTCTGGAAGTTCTATCAACAGGGGTGGCCGGGAACTATAACGGCGCCTTACAAGTGATGACGGCGGAGTTACAAGTGCCTTCGCCGCTGGTGCCAACGAGAGAGAGCTATTTCGTAAGGTATTGCAAGCAGCACGCGGACGGCACGTGGGCAGTCGTGGATGTGTCGTTGGACAATCTGCGGCCGAGTCCGTCGGCGAGGTGCAGGAGAAGGCCTTCCGGTTGCTTGATACAAGAAATGCCCAACGGTTACTCTAAGGTCATATGGGTTGAGCATGTTGAAGTTGATGACAGAGGTGTTCATAGTCTATACAAGCAGCTTGTTAGCTCTGGTCATGCCTTTGGTGCGAAACGCTGGATTGCAACCTTGGATCGGCAGTGTGAGAGGCTGGCTAGTGCCATGGCTACAAACATACCCACTGTTGATGTTGGAGTCATAACAAACCAAGAAGGGAGGAAGAGCATGCTCAAACTGGCGGAGAGAATGGTGATAAGCTTTTGTGCTGGTGTGAGTGCTTCAACGGCCCACACGTGGACAACGCTCTCTGGAACGGGTGCTGATGACGTCAGAGTCATGACACGTAAGAGTGTTGATGACCCTGGTAGGCCACCTGGCATTGTTCTCAGTGCTGCTACTTCTTTCTGGCTCCCAGTCCCTCCTAAAAGGGTCTTTGAATTCCTCCGTGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCCAATGGCGGAGTTGTCCAAGAAATGGCGCACATTGCTAATGGAAGAGATACCGGAAATTGCGTCTCTCTCCTTCGAGTCAATAGTGCGAATTCAAGTCAGAGTAACATGTTGATATTGCAAGAGAGTTGCACAGATTCAACTGGGTCGTTTGTGATCTATGCCCCTGTGGATATTGTTGCCATGAATGTGGTTCTGAACGGAGGGGATCCTGACTATGTGGCGCTTCTTCCTTCCGGCTTCGCCATTCTTCCGGATGGGACAACCCCTCACGGAGGTGGCGAAGCCGGTGGACATGGTGGTTCTCTCTTAACTGTTGCATTTCAAATACTGGTTGACTCAGTTCCAACCGCCAAGCTCTCTCTTGGTTCTGTTGCAACTGTTAACAACCTTATTGCTTGCACTGTTGAGAGAATTAAGGCTTCCCTATCCGGGGAAGCTCCTTCATAA | 2376 | 0.5114 | MPAGIMIPARNMMSSMIGRNNNLGGGFGSSSSSGLSLGQIENHNKGSETHQRSMDMFQANMMEGAQLHHHGLDMAQNTPDSDIPRIREDDFDSATKSGSENQEGGASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSSSSVPTRPLELGIGGFGGQSGMGGGDMYGGGGAGDLLRPMSGPSEADKPMIIELAVAAMEELIGMAQMGEPLWLTTIDGATTVLNEDEYVRSFPRGIGPKPNGFKCEASRETAVVIMNHVNLVEILMDVNQWSTIFSGIVSRAATLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHSLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTPHGGGEAGGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEAPS | 791 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211771g00009 | 791 | FunFam | Homeobox-leucine zipper protein HDG1 | 105 | 191 | - | - | |
Stsc211771g00009 | 791 | Gene3D | - | 355 | 529 | IPR023393 | - | |
Stsc211771g00009 | 791 | ProSiteProfiles | 'Homeobox' domain profile. | 115 | 175 | IPR001356 | GO:0003677 | |
Stsc211771g00009 | 791 | SMART | HOX_1 | 116 | 179 | IPR001356 | GO:0003677 | |
Stsc211771g00009 | 791 | Gene3D | - | 105 | 192 | - | - | |
Stsc211771g00009 | 791 | CDD | START_ArGLABRA2_like | 307 | 531 | - | - | |
Stsc211771g00009 | 791 | SUPERFAMILY | Bet v1-like | 551 | 782 | - | - | |
Stsc211771g00009 | 791 | SUPERFAMILY | Bet v1-like | 305 | 534 | - | - | |
Stsc211771g00009 | 791 | SUPERFAMILY | Homeodomain-like | 107 | 175 | IPR009057 | - | |
Stsc211771g00009 | 791 | MobiDBLite | consensus disorder prediction | 24 | 49 | - | - | |
Stsc211771g00009 | 791 | MobiDBLite | consensus disorder prediction | 24 | 44 | - | - | |
Stsc211771g00009 | 791 | MobiDBLite | consensus disorder prediction | 82 | 96 | - | - | |
Stsc211771g00009 | 791 | CDD | homeodomain | 118 | 176 | IPR001356 | GO:0003677 | |
Stsc211771g00009 | 791 | ProSitePatterns | 'Homeobox' domain signature. | 150 | 173 | IPR017970 | GO:0000981|GO:0006355 | |
Stsc211771g00009 | 791 | ProSiteProfiles | START domain profile. | 303 | 535 | IPR002913 | GO:0008289 | |
Stsc211771g00009 | 791 | FunFam | Homeobox-leucine zipper protein GLABRA 2 | 312 | 531 | - | - | |
Stsc211771g00009 | 791 | Pfam | START domain | 313 | 532 | IPR002913 | GO:0008289 | |
Stsc211771g00009 | 791 | MobiDBLite | consensus disorder prediction | 72 | 126 | - | - | |
Stsc211771g00009 | 791 | Pfam | Homeodomain | 118 | 173 | IPR001356 | GO:0003677 | |
Stsc211771g00009 | 791 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 116 | 785 | IPR042160 | - | |
Stsc211771g00009 | 791 | SMART | START_1 | 312 | 532 | IPR002913 | GO:0008289 | |
Stsc211771g00009 | 791 | Coils | Coil | 181 | 201 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211771g00009 | Stsc-Chr211771 | 48082 | 52177 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211771g00009 | 56 | 788 | Homeobox Transcription Factor Family | AT1G05230 | 78.755 | 0.0 | 1170 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Stsc211771g00009 | START | 5.9e-58 | CL0209 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211771g00009 | K09338 | - | gmx:100809556 | 1343.56 |