Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211768g00008 ATGGGTGGTAATCTTAATGCTGAATTATCCAAGAAAACTCCAATTCTTGGCCTCAAGGTTTGGGAAATAGTTGGAGTTGTGGTTGGATTGTCTATTATCATCATCCTCTCCATGCTCTCACTGTGTCTTACCTCAAGGAAGAAATCTAGAAAATCCAATGATAAGAAGATTCCTGTTAGTCAGATACCAACTGTCTCCAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCACCGAATGGGTTTGCTCCCCGTGATGGAATACTTCTTACCATTCATGACAAAACCGGTGATAAAGAATCAGACAAGGTCATGGTTCATTTAGGCGTGGGGAAGATGAAGAATAGTGGGGATAGTAGCAGCCAATCAGGCTCACTTCATCACATAGAGAAAGAGGGAGGTGGGTCACTGTCTGAAGAACATGGTAGCTCCGGCACGGTCGCCATGCACAAGCACTCTTCTTCTTACCCTATAACAGCTCCTTCGCCTCTGTCTGGTCTCCCAGAGTTCTCTCACTTGGGCTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCAACAAACCGGTTTTCCAAAGACAATGTCATTGGTGAAGGTGGGTATGGAGTTGTTTACCGAGGACAATTGATCAACGGGACTCCGGTGGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCCATTGGACATGTCCGGCACAAAAACTTGGTTCGCCTTTTGGGGTACTGCATTGAAGGGACTCACAGGATGTTAGTCTATGAGTATGTGAATAATGGAAACTTGGAGCAATGGCTTCATGGAGGTATGCGTCACCATGGATATCTTACTTGGGAAGCACGTATCAAGATTCTCCTTGGCACGGCCAAAGCGCTTGCGTATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATAAAGTCAAGCAATATATTAATTGATGGTGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCAAAGTTATTGGGTGCTGGAAAGAGTCATGTCACAACACGAGTTATGGGAACCTTTGGGTATGTGGCTCCTGAATATGCAAATACTGGCCTTCTGAATGAAAAGAGTGATGTATATAGCTTTGGTGTTTTGCTACTGGAAGCAATTACCGGAAGAGATCCGGTAGACTATGGACGCCCAACACACGAAGTGAATCTGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCAGAAGAGGTGATGGATCAAAACATTGAGACGAAACCATCAACCAGAGCTTTAAAGCGGGCTCTCCTAACTGCATTAAGATGCTTGGATCCAGATTCTGAGAAAAGGCCCAAGATGAGCCAAGTTGTGCGCATGCTGGAATCAGAGGAATACCCTTTAGCAAGAGAGGACCGGAGGAACAGAAGAAACCGAGGAGGAAGTGGTGATATTGATTCTCAAAAAGAATATTCTGACACAGACAAGAGTGAGGTTCAAGGTTCTAAATAA 1515 0.4449 MGGNLNAELSKKTPILGLKVWEIVGVVVGLSIIIILSMLSLCLTSRKKSRKSNDKKIPVSQIPTVSKEIKEVRVEQVSPNGFAPRDGILLTIHDKTGDKESDKVMVHLGVGKMKNSGDSSSQSGSLHHIEKEGGGSLSEEHGSSGTVAMHKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGGMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDGDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGNRRSEEVMDQNIETKPSTRALKRALLTALRCLDPDSEKRPKMSQVVRMLESEEYPLAREDRRNRRNRGGSGDIDSQKEYSDTDKSEVQGSK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211768g00008 504 CDD STKc_IRAK 197 463 - -
Stsc211768g00008 504 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211768g00008 504 Gene3D Transferase(Phosphotransferase) domain 1 267 479 - -
Stsc211768g00008 504 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Stsc211768g00008 504 MobiDBLite consensus disorder prediction 448 498 - -
Stsc211768g00008 504 FunFam Putative receptor-like serine/threonine-protein kinase 267 478 - -
Stsc211768g00008 504 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211768g00008 504 MobiDBLite consensus disorder prediction 139 158 - -
Stsc211768g00008 504 FunFam Putative receptor-like protein kinase 173 266 - -
Stsc211768g00008 504 MobiDBLite consensus disorder prediction 448 504 - -
Stsc211768g00008 504 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Stsc211768g00008 504 Pfam Protein kinase domain 192 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211768g00008 504 PANTHER OS01G0323000 PROTEIN 4 486 - -
Stsc211768g00008 504 MobiDBLite consensus disorder prediction 111 158 - -
Stsc211768g00008 504 SUPERFAMILY Protein kinase-like (PK-like) 175 466 IPR011009 -
Stsc211768g00008 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211768g00008 Stsc-Chr211768 28057 31278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211768g00008 134 465 Trihelix Transcription Factor Family AT1G70460 46.154 7.94e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc211768g00008 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211768g00008 - - gmx:100787014 807.364