Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211765g00008 ATGGAGTTTGCTGCTGCTGCTAGATCTGGTGGTGATGATGATAGAGGTGATGCACTCAAGGAAGAGAAGAAGAAGAAGAGAAGTGATGAGTATAGTGATGATGGAAGCCATGATCATCATGATCATGATCATGATGATGGTGCCTCAAATAATAAGCAAGACACAAAAATTATTGTCAAGGAGCCGCCACCATTGAATAAGACTAATAACAAGACTGAAAAATCCATGGCGGAAGAAGCTGCAGCTGCTGGAACAAGTAGCACATTATTCGCAACCAAAAAGGAAGAGGTTATTGATAAACAACTTGAAAGTACTAAAGCTGAAATGGGTGAAGTTCGAGAGGAGAACGAGCGGTTAAAGATGTCGTTGAGCAAGATTATGAATGAGTACAGAATGCTTCAAATGCAGTTTCACAACATAGTTAATAAGCATGAAGATACTAATAATAATAATAATGAAGAAACAGTAATGGAGGAAGCTGACCTAGTTTCTCTCAGCCTTGGAAGAGTTCCAGTTCCAAGAAGAAGCAATAATAATAATGAAGAAGAGAAAAAAGCATCTTATAATAATAACAAGAGGAAGAAGGAGGATGAGGACGAAGACGAAGACGAGGAAGAACTGAATGAGGAGTTGGCACTTGGATTGGACTGCAAGTTCGAAACTTCGAAATCGGGGAGCACGACGGAGGCTACCGCCAATTTGGGGAATAAGGAAGAAGGTGGGGAGAGTACATGGCCACCATCTAGCAAGGCGAGAGAAGGTGGCGGTTGCAGCGGTGGTGGTGCAACTGCGTCTGCGTCTGTTTCGGTAGCAGAAGATGAAGTGTCTCAGCAGAATAATACTCCTGCTGCAAAGAAAGCTAGAGTTTGTGTGAGGGCAAGATGTGACACCCCCACTATGAACGATGGGTGTCAATGGAGGAAATATGGACAAAAGATTTCAAAGGGAAATCCATGTCCTCGAGCTTACTATCGCTGCACAGTTGCACCCTCATGCCCTGTTAGAAAACAGGTGCAAAGATGCGCAGAGGACATGTCGATTCTAATCACCACCTACGAAGGCAACCACAACCACCCTCTCCCTCTAACAGCCACCGCCATGGCTTCCACAACCTCCGCCGCAGCATCCATGCTACTCTCCGGCTCCTCCTCAACCTCCCACACCACAAACCCCGCCACCGCCGGCCTCAACCTGTACCTCCCAGACGGATCCAAATCAAGACAAATCTACGTCTCAAACCCCGCACTCTCTTCCACACCTTCTCACCCAACCATAACCCTCGACCTCACTTCTTCAAACCCTAATTCAAACACCAATCCCTCATCATCTTCTCCCTTTGTTAGGTTTTCTTCAAATTACCCTAACCAGCCAATCAGATACCCTTCCTCCACAAGCCTTAGCTTCTCCACTTCCACTGATTCCAATCCAATTTCTTGGAGCAGCAATGGATTCCTCAGTAACTTCAACACCACTCATCATCATCATCAACAACCGTACAACAACAGAAACATCAACATTCTCAGTAATAATAATGTGAACTTTGGAAGGCAGCAACAGCAACAGCAACAGCAACAAACAATGGAAAACTTCTATCAATCTTTCTTGCAAAGGAACTCATCTTCATCATCAGACACTATTGCCGCAGCAACAAAGGCAATCACAGCAGATCCGAGTTTCCAATCGGCTTTGGCTGCGGCTTTGTCTTCCTTCATTGGCGGCGGCGGAATCGGAAGCACACAACATCAAGTTGGTGGCGGTGGTGGTGGTGAAGGAGAAAACAGTAATAATTTTATTAATCATCAAAAGATGAAATTCTCAGAGCTATTTCCAGTTTCCTCTGCCTTGGCTTCGAGTTCGAAAGTGAATAACAGTAGTAATAACAATGGCGGATGTGGTTCGAGCTTCTTGAACAAAACGCAGGCAACAAAAACAACAACACAGAATAATGGAAGCTTCATGTTTCTACCACCATCATTGCCATTTTCTTCTGCTCCCAAGAGTGCTTCTGCATCTCCCGGTGATAATAATGGAGGTGATGATCATAGATCATCATGA 2055 0.4467 MEFAAAARSGGDDDRGDALKEEKKKKRSDEYSDDGSHDHHDHDHDDGASNNKQDTKIIVKEPPPLNKTNNKTEKSMAEEAAAAGTSSTLFATKKEEVIDKQLESTKAEMGEVREENERLKMSLSKIMNEYRMLQMQFHNIVNKHEDTNNNNNEETVMEEADLVSLSLGRVPVPRRSNNNNEEEKKASYNNNKRKKEDEDEDEDEEELNEELALGLDCKFETSKSGSTTEATANLGNKEEGGESTWPPSSKAREGGGCSGGGATASASVSVAEDEVSQQNNTPAAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGNHNHPLPLTATAMASTTSAAASMLLSGSSSTSHTTNPATAGLNLYLPDGSKSRQIYVSNPALSSTPSHPTITLDLTSSNPNSNTNPSSSSPFVRFSSNYPNQPIRYPSSTSLSFSTSTDSNPISWSSNGFLSNFNTTHHHHQQPYNNRNINILSNNNVNFGRQQQQQQQQQTMENFYQSFLQRNSSSSSDTIAAATKAITADPSFQSALAAALSSFIGGGGIGSTQHQVGGGGGGEGENSNNFINHQKMKFSELFPVSSALASSSKVNNSSNNNGGCGSSFLNKTQATKTTTQNNGSFMFLPPSLPFSSAPKSASASPGDNNGGDDHRSS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 646 678 - -
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 262 283 - -
Stsc211765g00008 684 SUPERFAMILY WRKY DNA-binding domain 293 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 413 450 - -
Stsc211765g00008 684 Coils Coil 178 198 - -
Stsc211765g00008 684 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 601 IPR044810 GO:0003700
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 7 51 - -
Stsc211765g00008 684 Pfam WRKY DNA -binding domain 301 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 220 238 - -
Stsc211765g00008 684 Gene3D WRKY domain 284 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 646 684 - -
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 1 88 - -
Stsc211765g00008 684 Coils Coil 102 136 - -
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 165 283 - -
Stsc211765g00008 684 MobiDBLite consensus disorder prediction 176 197 - -
Stsc211765g00008 684 SMART WRKY_cls 300 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211765g00008 684 FunFam probable WRKY transcription factor 31 285 362 - -
Stsc211765g00008 684 ProSiteProfiles WRKY domain profile. 295 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211765g00008 Stsc-Chr211765 38709 44830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211765g00008 95 573 WRKY Transcription Factor Family AT1G18860 41.487 4.64e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211765g00008 WRKY 8.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211765g00008 - - adu:107467779 720.309