Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211762g00011 ATGGAAGGGTTGAAACCAGTGTTACTAATGGTGTTACTACAGATATTATATGCTGTGCTGAACATATTGTATAAGCTTGCTATATTTGATGGAATGAGCATGACAGTGGCTTCTGCTTACCGTCTCATATTTGCATCTGCCTTTACACTCCCACTTGCTCTCTTCTTTGATTGGAACAACCCGCCAAGAATCACTCTCAGGCTGCTTTTCATGGAATCTCTTTGTGGATTTTTCGGGGGAAGTTTATTTCTGAACCTTTATTTTGCTGCCCTGTCTCTGTTGCCGGCGACGTTCATGCTGGCCATCAACAACCTTTCTCCGGCTGTCACCTTCCTTATGGCCATAATCTTCCGTCTGGAAAAATTAAAGTTGGGATCAGCAGCAGGAAAAGCAAAGGTGATAGGAACATTAACTGGAATTACAGGGGCAATGGTGTTAAGCTTCTTCAGGGGAGTTAAAATTGATATTTGGTCAACACACATAGATCTCTTGCATTCAAATCACACACCACCACATGGTCATGGTGAATATGACAACAAATTCTTGGGTCTGACTTATGCCATAGCAAGCTGCTGCTCTTTTTCTTTGTGGCTCAACATTCAGGGTAAAATGAATACGAAAGAATACCCGAGCCATCTGACAGGGACAGCATTCATGTCCACAATGGGTGCAATTCAAGCCACTGTTTTTGCTCTCTTTCTTGATAGAGATTGGAGCCAGTGGCGTCTCGCTTGGAATATAAGGCTTCTCACTGTGGCTTATGCGGGAATTGTAGCTTCAGGAATAGTGGTTATTATTATTGCGTGGTGCATTGAAAAGAGAGGGCCTCTGTTTGCGTCTATTTTCAATCCTCTACAACTTGTGCTCGTCGCTATCGTTGCTTCTTTGATTCTCAATGAGAATTTATATTTAGGAAGTGTGGTTGGAGCAGTGGTGATAGTGATTGGGCTGTACACAGTGCTATGGGGAAAGAGCAAAGAGATTGAAGAGAAGAAGATGGAATTAGTATCCTTACAAATCAATAACAATAACAATAAAGGGTCTACTTCTGAAGCTGTTGACGTTCTTGTTAGTTAG 1077 0.4206 MEGLKPVLLMVLLQILYAVLNILYKLAIFDGMSMTVASAYRLIFASAFTLPLALFFDWNNPPRITLRLLFMESLCGFFGGSLFLNLYFAALSLLPATFMLAINNLSPAVTFLMAIIFRLEKLKLGSAAGKAKVIGTLTGITGAMVLSFFRGVKIDIWSTHIDLLHSNHTPPHGHGEYDNKFLGLTYAIASCCSFSLWLNIQGKMNTKEYPSHLTGTAFMSTMGAIQATVFALFLDRDWSQWRLAWNIRLLTVAYAGIVASGIVVIIIAWCIEKRGPLFASIFNPLQLVLVAIVASLILNENLYLGSVVGAVVIVIGLYTVLWGKSKEIEEKKMELVSLQINNNNNKGSTSEAVDVLVS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211762g00011 358 PANTHER WAT1-RELATED PROTEIN 5 329 IPR030184 GO:0016020|GO:0022857
Stsc211762g00011 358 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020
Stsc211762g00011 358 Pfam EamA-like transporter family 5 147 IPR000620 GO:0016020
Stsc211762g00011 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 326 - -
Stsc211762g00011 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211762g00011 Stsc-Chr211762 31644 34231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211762g00011 4 346 Nodulin-like Gene Family AT1G25270 40.816 4.49e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211762g00011 - - mtr:25493310 370.163