Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211762g00006 ATGGCTTCTAATGCAGATTGTGGTGATGATAATAATTTGGTAGCAGGAGAAGTAGTAGTTGTTGAAGCTCCAAACGATGAAAATGGTAAGGATGATGGGAAGCAAACAAAAGTAGCAGCGATGAGCGAAGAAGTAGACCATGGCAATAGTAATAATAATAAAGTTGACTATTCACAGAGGGGTCAATGGCTTCGAGCAGCTATTCTAGGAGCCAATGATGGGTTAGTCTCAGTTGCTTCATTGATTTTGGGTGTAGGAGCTGTTAAGAGAGACTCCAAAGCCATGTTACTTGCTGGCTTCGCAGGTTGCATTGCAGGAGCATGTAGCATGGCATTGGGTGAGTATGTTTCAGTTTCTACTCAGTATGAAGTTGAAGTTGGTCAAATCAAAAGGGACAGTAATTTGATGGAGGAAAAGAGGTTCTCATTGTTATTGCTGCCTAACCCATTGCATGCTGCTTTGGCATCTGCACTATCATTCACTGTAGGTGCAGTTATTCCTTTGGTTTTCACTGCATTTGTAAGAGATTACAAGTTAAGGCTTGTGTTGTGTGTGGTGGTGTCTAGCTTGGCTTTAGTGGGGTTTGGATTTTTGGGAGCAGTGTTGGGACACACACATAAGGTTAGGTCCTCTGTCAGGATCCTTATTGGGGGGTTGATGGCTATGGCTATCACTTTTGTGTTAACAAGATTAGTAGGCTTTGGTGCCAATTTGGAACTGTGA 723 0.426 MASNADCGDDNNLVAGEVVVVEAPNDENGKDDGKQTKVAAMSEEVDHGNSNNNKVDYSQRGQWLRAAILGANDGLVSVASLILGVGAVKRDSKAMLLAGFAGCIAGACSMALGEYVSVSTQYEVEVGQIKRDSNLMEEKRFSLLLLPNPLHAALASALSFTVGAVIPLVFTAFVRDYKLRLVLCVVVSSLALVGFGFLGAVLGHTHKVRSSVRILIGGLMAMAITFVLTRLVGFGANLEL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211762g00006 240 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 36 232 IPR008217 GO:0005384|GO:0030026
Stsc211762g00006 240 CDD Nodulin-21 62 207 - -
Stsc211762g00006 240 Pfam VIT family 64 137 IPR008217 GO:0005384|GO:0030026
Stsc211762g00006 240 Pfam VIT family 146 229 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211762g00006 Stsc-Chr211762 19240 20158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211762g00006 45 233 Nodulin-like Gene Family AT3G43660 57.143 2.17e-73 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211762g00006 K22736 - han:110892040 204.912