Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211762g00005 ATGGCTTCCACCAATGGAACTTCACCTAACCACATTGAAATTCCCATGCATGCAAATGGTGCTACTACTCTTGTGGTGGAGCCAAAACCAAACCAAGACAGCAATAATACTAACTACACTCAAAGGGCTCAGTGGCTCAGAGCAGCCGTGCTCGGAGCCAACGACGGGCTAGTCTCCGTTGCATCACTCATGATGGGTGTTGGAGCTGTTAAGCATGACATCACAGCCATGCTTATATCAGGCTTCGCTGGCCTAGTAGCCGGAGCATGCAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGAAGGCTCAGATAAAGAGAGAAAGAGAATCAAATGAAGAAGTAGTAGTAGTATTGCCAAATCCATTTCAAGCTGCAGTAGCATCAGCAATGGCATTTTCTGTGGGTGGTGTAGTGCCAATGGTAGCAGCTTTCTTCATAAGGAACCATAAGGTTAGAATGGTTGTTGTTGCTGTTGCTGTTAGCTTAGCATTGTTGGTGTTTGGAACTTTTGGAGCAGTTCTTGGTAGAACTCCTGTCACAAGATCCTGTCTCAGGGTTCTCATTGGAGGTTGGATGGCCATGGCTATCACATTTGGCTTCACCAAGTTGATTGGCTCTCTTGCACTTTAA 651 0.4593 MASTNGTSPNHIEIPMHANGATTLVVEPKPNQDSNNTNYTQRAQWLRAAVLGANDGLVSVASLMMGVGAVKHDITAMLISGFAGLVAGACSMAIGEFVSVYTQYDIEKAQIKRERESNEEVVVVLPNPFQAAVASAMAFSVGGVVPMVAAFFIRNHKVRMVVVAVAVSLALLVFGTFGAVLGRTPVTRSCLRVLIGGWMAMAITFGFTKLIGSLAL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211762g00005 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 211 IPR008217 GO:0005384|GO:0030026
Stsc211762g00005 216 Pfam VIT family 46 119 IPR008217 GO:0005384|GO:0030026
Stsc211762g00005 216 Pfam VIT family 126 208 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211762g00005 Stsc-Chr211762 17687 18559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211762g00005 31 216 Nodulin-like Gene Family AT3G43660 65.079 3.35e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211762g00005 K22736 - gmx:100802489 290.426