Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211762g00004 ATGGCTGCTTCCCTTGGCACTCAGAACAAAAATGAAATGCCACTTAAACATGTTATGATCCACGTGCATGGTACTAGTGATGCAGAAGCAGCAAAAGCAAGCCAAAGCACTGAAGAAAACAATAACACTACTGACTACTCTCAAAGAGCACAGTGGCTCCGAGCAGCAGTGCTTGGGGCCAATGATGGACTTGTCTCAGTGGCATCACTCATGCTGGGTGTTGGAGCTGTGAACAAGAACATTGCAGCCATGCTTGTAGCCGGATTCGCAGGGCTAGTAGCCGGAGCATGCAGCATGGCAATTGGAGAGTTTGTCTCTGTCTACACTCAACTTGACATAGAAGTAGCTCAAATAAAAAGAGAAAGGGAACTCAACAATGAATTGGAGACAGGAGAAGGTGGTAGTGAAGAGGAGAAGCTGCCAAATCCTTTTCAAGCGGCGATAGCGTCAGCAATCGCATTTTCTGTTGGTGCAGCAGTGCCACTGATAGCAGCAGTGTTTATAAGGGAGTATAGGATCAGGGTTGGTGTTGTTGCTGCTGTGTCTAGCTTGGCATTGTTGGTATTTGGAGGGGTAGGAGCAGTTCTTGGAAAAACTCCAGTGAGAAGGTCTTGTATCAGAGTTCTGATTGGAGGTTGGTTGGCTATGGCTATAACTTTCGGCCTCACCAAGTTAATAAGCTTAAAGGGAATGTAA 696 0.4641 MAASLGTQNKNEMPLKHVMIHVHGTSDAEAAKASQSTEENNNTTDYSQRAQWLRAAVLGANDGLVSVASLMLGVGAVNKNIAAMLVAGFAGLVAGACSMAIGEFVSVYTQLDIEVAQIKRERELNNELETGEGGSEEEKLPNPFQAAIASAIAFSVGAAVPLIAAVFIREYRIRVGVVAAVSSLALLVFGGVGAVLGKTPVRRSCIRVLIGGWLAMAITFGLTKLISLKGM 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211762g00004 231 Pfam VIT family 53 129 IPR008217 GO:0005384|GO:0030026
Stsc211762g00004 231 Pfam VIT family 134 223 IPR008217 GO:0005384|GO:0030026
Stsc211762g00004 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 32 227 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211762g00004 Stsc-Chr211762 14852 15547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211762g00004 38 231 Nodulin-like Gene Family AT3G43660 63.918 5.97e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211762g00004 K22736 - gmx:100817158 268.085