Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211756g00004 ATGTCGTCGGAGTCGGAGACACAGCAAACGGAGTCCTCTCGGATTCTGCGGCAGATCAATGAGTTGAAGCAAGAAAGGTCCGCAATTGACACCAAAATCTCTGCGCTTCAATCTCAGCTCAACAATCTTCAACTCAAAAACGCCGTCGTATCCAATGGCTCTTCTTTGGAGCCTCACATGATCTACAGATACAGTCGCCACCTTCTGCTTCCTTCCTTTGGTGTTCAAGGTCAGGCAAATCTGTTGAAGGCATCAATTTTGGTCGTGGGAGCTGGAGGATTGGGTTCCCCTGCATTGCTATACCTTGCAGCTTGTGGTGTTGGTCGCTTGGGTATTGTAGATCATGATGTGGTTGAGCTGAATAATATGCATAGGCAGGTTATCCACACAGAAGCATATATTGGTCAGCCGAAAGTGAAATCCGCTGCTGCTGCTTGTCGCGCGATCAACTCCACTATTCAGATTGTGGAGCATCAAGAAGCTTTGCGGACCTCCAATGCTTTGGAAATATTCAGCAAATATGATATAATAGTAGATGCTACAGATAATGCTCCTAGCAGGTACATGATCAATGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCCGGTGCTGCACTGGGATTGGAAGGGCAGCTCACTGTTTACAATTATAATGGTGGTCCTTGCTATCGATGTCTCTTTCCAACTCCACCACCTACAACAGCATGCCAAAGATGTGCTGATAGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGTTGTCTCCAAGCTCTTGAGGCAATCAAGATTGCAGCTTCTGTTAAAATTAGAGGAAGGTCCATGCAATGCGAAGTTTGCGCAGAAAACACAACCTTTAAGCAACAGCAATTCCAAGAATTTGACTACGAAAATTTCACTCAATCTCCCTTATCTGTGGGTCCTTTGAGGCTAAATCTACTTCCCACTGAATCAAGAATCAGCAGCAAGGAGTATAGCGACATAGTTCTTAACAAGGAACCACACGTGTTGCTCGACGTTAGACCAGCTCACCATTTCAAGATTGTATCACTCCCCCAATCCCTGAACATTCCTCTGTCAACTCTAGAGGCTAGGTTGCCTGAATTATCAACAGCTCTGAAGAAAGAGGAAGAAGAGAAAGGTGTAGCTTCACAATTGTATGTTGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCAGAAAATGGGTTACACTTCTGCCAAAGATATAGTTGGGGGATTAGAGTCTTGGGCCCACAATGTGGATCGAAGCTTCCCTACATATTAG 1299 0.4488 MSSESETQQTESSRILRQINELKQERSAIDTKISALQSQLNNLQLKNAVVSNGSSLEPHMIYRYSRHLLLPSFGVQGQANLLKASILVVGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQVIHTEAYIGQPKVKSAAAACRAINSTIQIVEHQEALRTSNALEIFSKYDIIVDATDNAPSRYMINDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIAASVKIRGRSMQCEVCAENTTFKQQQFQEFDYENFTQSPLSVGPLRLNLLPTESRISSKEYSDIVLNKEPHVLLDVRPAHHFKIVSLPQSLNIPLSTLEARLPELSTALKKEEEEKGVASQLYVVCRRGNDSQRAVQYLQKMGYTSAKDIVGGLESWAHNVDRSFPTY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211756g00004 432 FunFam Adenylyltransferase and sulfurtransferase MOCS3 57 290 - -
Stsc211756g00004 432 Pfam Rhodanese-like domain 323 422 IPR001763 -
Stsc211756g00004 432 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 36 432 IPR028885 GO:0002143|GO:0004792|GO:0005829
Stsc211756g00004 432 Coils Coil 359 379 - -
Stsc211756g00004 432 CDD RHOD_ThiF 311 432 - -
Stsc211756g00004 432 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 61 399 IPR035985 GO:0008641
Stsc211756g00004 432 CDD ThiF_MoeB_HesA_family 63 264 - -
Stsc211756g00004 432 Pfam ThiF family 64 284 IPR000594 -
Stsc211756g00004 432 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 59 330 IPR045886 -
Stsc211756g00004 432 FunFam Adenylyltransferase and sulfurtransferase MOCS3 318 432 - -
Stsc211756g00004 432 Coils Coil 5 46 - -
Stsc211756g00004 432 Gene3D - 318 432 IPR036873 -
Stsc211756g00004 432 Gene3D - 59 286 - -
Stsc211756g00004 432 ProSiteProfiles Rhodanese domain profile. 331 430 IPR001763 -
Stsc211756g00004 432 SMART rhod_4 321 427 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211756g00004 Stsc-Chr211756 16323 19512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211756g00004 107 432 Sulfurtransferasese or Rhodanese AT5G55130 69.034 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211756g00004 K11996 - gmx:100801820 674.47