Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211752g00001 ATGCAGTTAAGGGTACTTGAGGAATTGTACAGAAAAGGAACTGAGACTCCTTCCACTTCACAAATCCAGAAGATAACTTCTAAGCTGAGACGCTATGGAAATGTTGAGGGCAAGAATGTCTTTTACTGGTTCCAGAATCACAAGGCTAGGGAGCGAAGGAAGCGCCGCCGTGCCGGCAAGACGGAGGAAACTGCTTCTTGTTCTGCCCAAGGGTTATCGAAAGCTAAAGAGACGAACTGCACTAGTGGTGAACATGCAGAAGATCAGGAATTCGAAAGGAAGGATAATGAGTGTAGAAACATGGATTACTTTAAGATGATTCCCTCCATTAACATAGCAGCAACTACTTCTTCGGTGGCTTCAAAAATAACACAAAAGATTATTCAACTTCCAAGTAGTAGTAAAGAAAATGAGGATGATAATAATGAGGATCCTCGAACCCTCGAGCTTTTTCCACTTAACAAGAAGGATGAAGAAGAAGATAATAAGAGCCTCATTTCCTTGTCGGAGAGCGAATCCAAGAAATTCTGTGCCAATGAAGAAGTCAGCTACCACCATCAGTTTTTTGAGTTTCTTCCATCAAGATAG 588 0.4184 MQLRVLEELYRKGTETPSTSQIQKITSKLRRYGNVEGKNVFYWFQNHKARERRKRRRAGKTEETASCSAQGLSKAKETNCTSGEHAEDQEFERKDNECRNMDYFKMIPSINIAATTSSVASKITQKIIQLPSSSKENEDDNNEDPRTLELFPLNKKDEEEDNKSLISLSESESKKFCANEEVSYHHQFFEFLPSR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211752g00001 195 MobiDBLite consensus disorder prediction 63 79 - -
Stsc211752g00001 195 MobiDBLite consensus disorder prediction 52 92 - -
Stsc211752g00001 195 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Stsc211752g00001 195 Pfam Homeodomain 2 53 IPR001356 GO:0003677
Stsc211752g00001 195 Gene3D - 1 62 - -
Stsc211752g00001 195 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 191 IPR044555 GO:0003700|GO:0099402
Stsc211752g00001 195 MobiDBLite consensus disorder prediction 136 163 - -
Stsc211752g00001 195 MobiDBLite consensus disorder prediction 130 163 - -
Stsc211752g00001 195 ProSiteProfiles 'Homeobox' domain profile. 1 54 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211752g00001 Stsc-Chr211752 4878 8434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211752g00001 2 73 Wox Gene Family AT3G18010 68.919 1.06e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Stsc211752g00001 Homeodomain 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211752g00001 - - gmx:100788830 126.716