Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211749g00004 ATGAATGAGATAGGAGGGAGGGAGAGTAGCTTCGGCCCTAAGGGGAAAGAAGGGAAGCTCATTGGCTTTGCATTGCTTGAGGCCATACAACCAATGAAAGCAAAAAGGTGTGTTTACGACGTCACAAAATTTTTAGATGATCACCCTGGTGGAGGTGACGTGGTTGTATCTTCCACGGCAAAAGATGCAACCGATGATTTTGAAGATGTTGGTCACAGTAAGAATGCTAGGAAAATGTTAAATGACTACTACATAGGAGACATTGATTTGTCGACCATGAAATCTACTGGGGTTAAGTCTCCTACATCTTCTAAACAAGCTCAACAACCTCCATCATCAACTTCATCTTCATCATCATCTTCATCATCGTCAAACTTAACCGCCAAGATCCTCCAGTTTTTAATTCCCTTGATTATCTTGGGTTTCGCATTTGGTATTCGTTTCTATAAGAAATCAGAATAA 462 0.4069 MNEIGGRESSFGPKGKEGKLIGFALLEAIQPMKAKRCVYDVTKFLDDHPGGGDVVVSSTAKDATDDFEDVGHSKNARKMLNDYYIGDIDLSTMKSTGVKSPTSSKQAQQPPSSTSSSSSSSSSSNLTAKILQFLIPLIILGFAFGIRFYKKSE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211749g00004 153 Gene3D - 30 92 IPR036400 -
Stsc211749g00004 153 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 35 92 IPR036400 -
Stsc211749g00004 153 PRINTS Cytochrome B5 signature 48 62 IPR001199 -
Stsc211749g00004 153 PRINTS Cytochrome B5 signature 63 70 IPR001199 -
Stsc211749g00004 153 PRINTS Cytochrome B5 signature 38 48 IPR001199 -
Stsc211749g00004 153 PRINTS Cytochrome B5 signature 76 88 IPR001199 -
Stsc211749g00004 153 Pfam Cytochrome b5-like Heme/Steroid binding domain 37 88 IPR001199 -
Stsc211749g00004 153 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 44 51 IPR018506 GO:0020037
Stsc211749g00004 153 SMART Cyt_b5_2 24 89 IPR001199 -
Stsc211749g00004 153 MobiDBLite consensus disorder prediction 95 123 - -
Stsc211749g00004 153 PANTHER CYTOCHROME B5 35 151 - -
Stsc211749g00004 153 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 38 89 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211749g00004 Stsc-Chr211749 30640 32897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211749g00004 15 153 NADPH P450 reductases AT5G48810 51.370 1.17e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211749g00004 K23490 - ath:AT5G48810 127.872