Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211747g00007 ATGTTGTCGTGTTCTCCATCATCATCATCATCTGAAGAAGAAGATGAGGGATTCGAATCTTATAGAAGAGGAGGGTATCATGCTGTTAAAATTGGTGATCAATTTGCAGGTGGAAGATACATAGCACAAAAGAAGCTTGGTTGGGGTCAATTTTCCACCGTTTGGCTTGCTTATGATACTAAAGATGAGAAATATGTTGCTCTAAAGATCCAAAAGAGTGCAGCACAATTTGTTCAAGCTGCACTTCATGAGATTGATATCCTTTCAGCCCTTGGAGATGGCACCCCTTCATATACAAAATTTGTTGCTCAACTAATTGACCAATTTAAGCACGCTGGCCCTAATGGCAGTCACCTTTGCATGGTTCTTGAGTTTCTTGGTGATAGCTTACTTCGTCTAATCAGATTCATGCGTTATAAAGGCGTTCCATTGACGAAAGTTAGGGAGATTTGCACATGCATTTTGATCGGTTTGGATTACTTGCATCGAAAACATGGCATCATTCATACCGACCTTAAACCCGAAAATATTCTTCTTATTTCGCCCATTGATCCCTCCAAAGACCCTTTCAGATCGGGAGCATCTCCCATTCTGGAAAGGCCCGAGGGAGGGACCAACGGCGGCGGTGTTACTAGTCATATGGAGAAGAAGCTGAAAAGGAGAGCGAGGAAAATGAGTATGAGTTTATCCCTTGGACAAGGAAATTCGATAGAAGAATATCTAAAACCGAACAGAAATATCGACGAAATCGATATTAGATGCAAGATAGTTGATTTTGGGAATGCTTGTTGGGCAGATAATCAATTTACAGATATGGTTCAAACAAGGCAATATAGGGCTCCTGAAGTTATATTGCAAGCTGGGTATTCGTTTTCAATTGATATGTGGTCTTTTGCTTGTATTGCTTTTGAGCTTGCAACTGGTGATATGTTGTTCAGTCCCAGGTCTGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCTTTGATGATGGAACTCCTAGGAAAGTTCCCTAAGAAGGTTGCTACGTCTGGAGCGAAATGCAAGGATTTCTTTGACAGACATGGAGATTTGAAAAGAATTAGAAGACTAAAAACATGTCCACTGAAGAAATTGTTGGTTGAGAGATACAAATTTTCAGAGAAAGATGGGAATGAATTCTCAGAATTTCTGTTGCCACTTCTTGATCTTTCACCAGAGAAAAGGCCAAGTGCACAACAATGCTTGCAACACCCTTGGCTTCAAGCCATAGACTATGCTCCTATTGACATCATCAATAATCAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTCTTGAAAATATTAATGTTGGGATCAGAAACCTTGAAATTTCT 1377 0.3885 MLSCSPSSSSSEEEDEGFESYRRGGYHAVKIGDQFAGGRYIAQKKLGWGQFSTVWLAYDTKDEKYVALKIQKSAAQFVQAALHEIDILSALGDGTPSYTKFVAQLIDQFKHAGPNGSHLCMVLEFLGDSLLRLIRFMRYKGVPLTKVREICTCILIGLDYLHRKHGIIHTDLKPENILLISPIDPSKDPFRSGASPILERPEGGTNGGGVTSHMEKKLKRRARKMSMSLSLGQGNSIEEYLKPNRNIDEIDIRCKIVDFGNACWADNQFTDMVQTRQYRAPEVILQAGYSFSIDMWSFACIAFELATGDMLFSPRSGQGFSEDEDHLALMMELLGKFPKKVATSGAKCKDFFDRHGDLKRIRRLKTCPLKKLLVERYKFSEKDGNEFSEFLLPLLDLSPEKRPSAQQCLQHPWLQAIDYAPIDIINNQNNNNNNNNNNNNNNNNSLENINVGIRNLEIS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211747g00007 459 ProSiteProfiles Protein kinase domain profile. 40 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211747g00007 459 Gene3D Transferase(Phosphotransferase) domain 1 94 414 - -
Stsc211747g00007 459 FunFam Protein kinase superfamily protein 26 125 - -
Stsc211747g00007 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Stsc211747g00007 459 Pfam Protein kinase domain 41 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211747g00007 459 Pfam Protein kinase domain 253 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211747g00007 459 Gene3D Phosphorylase Kinase; domain 1 26 125 - -
Stsc211747g00007 459 MobiDBLite consensus disorder prediction 428 447 - -
Stsc211747g00007 459 FunFam Serine/threonine-protein kinase SRPK-like protein 244 414 - -
Stsc211747g00007 459 SMART serkin_6 40 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211747g00007 459 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 231 436 - -
Stsc211747g00007 459 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Stsc211747g00007 459 SUPERFAMILY Protein kinase-like (PK-like) 34 421 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211747g00007 Stsc-Chr211747 54092 57465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211747g00007 8 417 EF-hand Containing Proteins AT5G22840 48.268 3.89e-156 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Stsc211747g00007 Pkinase 1.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211747g00007 K08832 - gmx:100811724 660.603