Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211743g00009 ATGGCGGTACCTTTTGATTTCCATGACCACATCCAACTTTTCCTCATTTGGCTTATCTCCACCGTTGTTGTTCGACTCATTCTCACAAGAAACCGCAAGAAAAACGGTCAGCAAAACTCACTACCAAGTCCACCATGGCTACCTATCATTGGACACCTTCACTTAATCTCTTCCTTACCACACCAAAGCTTCCATAGCCTCTCATCTCGCTATGGACCCATCATGCAAGTCTTCCTCGGCTCAATCCCTTGTGTGGTGGTTTCTTCTCCGGAAATCGCGAAAGAGTTTCTCAAAACACACGAAACCGCCTTCTTAGACCGCTTCAGAAGCTCCGCGGTTCATTACTTGTCTTACGGCTCAAAGGGTTTCTTGTTTGCGCCTTACGGAAGCTTCTGGAAGTTCATGAAGAAGCTCTGCATGTCGGAGCTCCTTGGTCAACGAACACTCGACCAGCTTCTCTCCTTAAGAAAGCAGGAGACTCTTAGATTCCTTAGAGTCTTGCAGAAGAGGGGAGAAGCTGGCGAATTTGTTGACCTTGGTAATGAGCTTTTGACTCTCACCAACAGCATCATTTCGAGGATGACGATGAGCGTAACATGTTGCGAGGATGGTGGCGATGGCAATGGCGACGACGCAAAAGCAATGAGGAAGATGGTGAAAGACACTGCTGAACTAGCTGGAATATTTAATGTTTCGGATTTTATTTGGTTGTTTAAGAATTGGGACTTGCAAGGGATGAATAAGAGGCTTAAGGAGATTTTGGAGAGGTTTGATTCAATGATGGAGAGAATCATAAGGGAACATGAATTGGTAAGGAAGAAAAGAAAAGAAGAAGGAGGTGAAAGTGAAGGTGGTAGTGTGAGGGACTTGCTTGATATTTTGCTGGAAATACATGAAGATAAGAAGAGGAATGATGAGATAGAATTGAGCAGAGACAATATCAAGGCTTTCATATTGGACTTATTCATGGCAGGAACTGACACTTCAGCTATCACCATTGAATGGGCACTTGCAGAGTTAATTAACAACCCACGTGTAATGGAAAAAGCAAGACAAGAGATTGATTCAGTAACAAGAAGAAACAGATTAATAGAAGAATCAGATCTTCCAAACCTTCCTTACTTGCGAGCCATAGTTAAAGAAACGCTAAGACTTCATCCTGGAGCACCACTTTTAGGGAGACGATCAACTGAAGCCTCCACCGTTTGTGGCTATGAAATTCCATCAAAGTCCTTATTGTTTATTAACTTGTGGTCTATGGGCAGGGACCCTAGGATTTGGGACAACCCTCTTGAGTTTAGGCCAGAGAGGTTCATTGAAGAAGGACAATTGATGGATGTGAGAGGACAATATTTTCAACTAATGCCATTTGGAACTGGAAGAAGGGTGTGCCCTGGAGCTTCTCTAGCACTTCAAATTGTACCTTCTAATCTTGCTGCCATGATTCAGTGTTTTGAGTGGAAGGTTGAAGGCGTTGTTAGTATGGAAGAAAAACCTGGTGCGACTGCTCCAAGAGCTCATCCTTTAATTTGTGTCCCTGTGCCTCGCTTTAATGTCTTTTCTTCAATTGATGATTCTGTGTAG 1584 0.4343 MAVPFDFHDHIQLFLIWLISTVVVRLILTRNRKKNGQQNSLPSPPWLPIIGHLHLISSLPHQSFHSLSSRYGPIMQVFLGSIPCVVVSSPEIAKEFLKTHETAFLDRFRSSAVHYLSYGSKGFLFAPYGSFWKFMKKLCMSELLGQRTLDQLLSLRKQETLRFLRVLQKRGEAGEFVDLGNELLTLTNSIISRMTMSVTCCEDGGDGNGDDAKAMRKMVKDTAELAGIFNVSDFIWLFKNWDLQGMNKRLKEILERFDSMMERIIREHELVRKKRKEEGGESEGGSVRDLLDILLEIHEDKKRNDEIELSRDNIKAFILDLFMAGTDTSAITIEWALAELINNPRVMEKARQEIDSVTRRNRLIEESDLPNLPYLRAIVKETLRLHPGAPLLGRRSTEASTVCGYEIPSKSLLFINLWSMGRDPRIWDNPLEFRPERFIEEGQLMDVRGQYFQLMPFGTGRRVCPGASLALQIVPSNLAAMIQCFEWKVEGVVSMEEKPGATAPRAHPLICVPVPRFNVFSSIDDSV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211743g00009 527 CDD CYP93 72 513 - -
Stsc211743g00009 527 Coils Coil 347 367 - -
Stsc211743g00009 527 Pfam Cytochrome P450 42 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 FunFam Cytochrome P450 family protein 32 511 - -
Stsc211743g00009 527 Gene3D Cytochrome P450 25 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PANTHER CYTOCHROME P450 98A9 13 516 - -
Stsc211743g00009 527 SUPERFAMILY Cytochrome P450 42 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211743g00009 527 Coils Coil 243 267 - -
Stsc211743g00009 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211743g00009 Stsc-Chr211743 36873 40646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211743g00009 13 516 Cytochrome P450 AT5G06900 48.413 3.10e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211743g00009 K24188 - gmx:100805931 697.197