Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211742g00003 ATGATGGAGGACGAGTCCAGCGAGAATCGGAAACAAGCGAGGCTCGTGATTCTAGAGCTCGCAAACATGATAAGCGTTCCGATGGCGCTCAACGCCGTCGTACGCCTCAACGTCGCCGACGCCATTTGGCAGGGCGGCGCCAACAACCCCCTTTCCGCCATCGAGATCCTAACTCGAGTCCTCCCCGAAGGCAACGGCGACGCCGAGAACCTCCAGCGCTTGCTCCGCTTGCTAGCCAGCTACGGCGTCTTCAAGGAGCATTCTCCTTCCGGCGGCGGCGAAGGAGAGAGCAAGTACTCGTTAACCGACGTAGGCAAAACGCTGGTGACGGATAAGGAAGGCTTATCTTTTGCGCCATTCGTACTTCAGCACCACCAGGATGCGTTGATGAGAGCATGGCCGTTGGTGCATGAGGCAGTGGTTGATCCTTCCAAGGAGCCCTTCGAGAGGGCCAATGGAGAGCCAGCATACAGTTACTACCTCAAACAAGGCAATATGAATGAGCTCATGGTCAAGGCCATGTCTGGGGTCTCTGTGCCCTTCATGAGGGCCATGCTCCAGGCCTACGACGGCTTCCGTGGAGTCCAGAGGCTTGTGGATGTTGGTGGCAGCGGCGGCGACTGCCTCCGGATGATTCTCCAGAAACATCCCAATGTTAAGGAAGGCATCAATTTTGACCTCCCTGAAGTGGTGGCCAAAGCACCACAAATTCCAGGTGTAACCCATGTGGGCGGTGACATGTTCAAATCCATTCCTCAAGCTGATGCGATCTTCATGAAGTGGGTGCTTACAACATGGACAGACGATGAGATCAAGAAGATAATGCAAAACTGCTACAACTCACTCCCAGAAGGAGGGAAGCTCATTGCATGCGAGCCGGTGCTGCCGGAGAACTCGGACGACAGCCACAGAACAAGGGCGTTGCTTGAAGGCGACATATTCGTCATGACAATATACAGAGCCAAAGGGAAACACAGGACTGAAGAACAGTTCAGGAAGCTTGCAGTTTCTGTAGGCTTCCCTAGTTTCCGGGCATTCCATGTTGATCACTTCTACACCGTGCTCGAGTTTCAGAAATGA 1080 0.5398 MMEDESSENRKQARLVILELANMISVPMALNAVVRLNVADAIWQGGANNPLSAIEILTRVLPEGNGDAENLQRLLRLLASYGVFKEHSPSGGGEGESKYSLTDVGKTLVTDKEGLSFAPFVLQHHQDALMRAWPLVHEAVVDPSKEPFERANGEPAYSYYLKQGNMNELMVKAMSGVSVPFMRAMLQAYDGFRGVQRLVDVGGSGGDCLRMILQKHPNVKEGINFDLPEVVAKAPQIPGVTHVGGDMFKSIPQADAIFMKWVLTTWTDDEIKKIMQNCYNSLPEGGKLIACEPVLPENSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFRKLAVSVGFPSFRAFHVDHFYTVLEFQK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211742g00003 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 359 IPR016461 GO:0008168
Stsc211742g00003 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 357 IPR029063 -
Stsc211742g00003 359 PANTHER O-METHYLTRANSFERASE 20 346 IPR016461 GO:0008168
Stsc211742g00003 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Stsc211742g00003 359 Gene3D - 2 113 IPR036388 -
Stsc211742g00003 359 FunFam Caffeic acid 3-O-methyltransferase 114 359 - -
Stsc211742g00003 359 Pfam O-methyltransferase domain 137 340 IPR001077 GO:0008171
Stsc211742g00003 359 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Stsc211742g00003 359 Gene3D Vaccinia Virus protein VP39 114 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211742g00003 Stsc-Chr211742 19397 30834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211742g00003 2 359 Monolignol Biosynthesis Gene Families AT3G53140 73.481 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211742g00003 - - gmx:100784957 613.994