Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211741g00003 ATGGATTCAGCGAGGAGTTGGTTTCAGAAGTTTCAGCCTCGTGATAAGACAAAAGGGTTTGGAAAGAAGAAGGAGGAAGATAACAACGGAGGAGGAGCAGAAGTTTCGAGTGTAGCTGTTGATGAAGCTTCTCTTTCCAATGACACAAAGCAGAAGGTTGCTGCTGCAAAGCAGTATATTGAAAACCATTACAAGGAGCAAATGAAGAATCTTCAGGAGAGGAAGGATCGTCGGACCTTTTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTACTTAAATTTTTGGAGAAAAAGGAAACTGAATATATGCGTCTTCAGAGGCATAAGATGGGAGTTGATGATTTTGAATTGCTGACTATGATTGGCAAAGGTGCATTTGGTGAGGTCAGAGTTTGTAGGGAAAAGACTACGGGTCAGGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTCAGAGCTGAAAGGAATCTCCTTGCTGAGGTTGATAGCAATTGCATAGTCAAACTGTATTGTTCTTTTCAGGATGATGAGTATCTATATCTTATTATGGAGTATCTTCCTGGTGGGGATATGATGACACTGCTTATGAGAAAGGATACCTTGACAGAAGATGAGGCCAGATTTTATGTAGCAGAAACAATTCTGTCTATTGAATCCATACATAAACACAATTATATACATAGGGATATCAAGCCAGACAACTTACTACTTGATAGATATGGACACTTGAAACTGTCTGATTTTGGACTTTGTAAACCATTAGATTGTAGTACAATTGCCGAAGGGGATTTTTCTGTGGGTCAGAATGTGAATGGATCTACACAAAACGATGAACGTGTTATTTCAAAACGCACACAACGAGAACAATTACAACACTGGCAACAGAACAGGAGGACACTTGCCTATTCCACTGTTGGTACACCAGATTATATTGCTCCGGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAGATGCTGGTAGGATATCCACCATTTTATTCTGATGATCCGATGACGACATGTAGGAAGATAGTAAATTGGAGATCTCACTTGAAATTTCCTGAAGAAGCAAGGCTATCCCGAGAGGCTAAAGATCTTATTTGTAAACTTCTGTGCAATGTGAACCACAGGCTGGGGTCCAAAGGTGCAGATGAAATAAAGGTGTTGTACGGTTCACCCATTCTTCAATGGTGTTGA 1281 0.4036 MDSARSWFQKFQPRDKTKGFGKKKEEDNNGGGAEVSSVAVDEASLSNDTKQKVAAAKQYIENHYKEQMKNLQERKDRRTFLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETILSIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLDCSTIAEGDFSVGQNVNGSTQNDERVISKRTQREQLQHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWRSHLKFPEEARLSREAKDLICKLLCNVNHRLGSKGADEIKVLYGSPILQWC 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211741g00003 426 Coils Coil 64 84 - -
Stsc211741g00003 426 Gene3D Phosphorylase Kinase; domain 1 93 205 - -
Stsc211741g00003 426 Gene3D Transferase(Phosphotransferase) domain 1 314 415 - -
Stsc211741g00003 426 Pfam Protein kinase domain 123 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211741g00003 426 MobiDBLite consensus disorder prediction 9 30 - -
Stsc211741g00003 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Stsc211741g00003 426 FunFam Non-specific serine/threonine protein kinase 206 273 - -
Stsc211741g00003 426 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Stsc211741g00003 426 CDD MobB_NDR_LATS-like 56 117 - -
Stsc211741g00003 426 FunFam Non-specific serine/threonine protein kinase 93 205 - -
Stsc211741g00003 426 MobiDBLite consensus disorder prediction 1 37 - -
Stsc211741g00003 426 Gene3D Transferase(Phosphotransferase) domain 1 206 283 - -
Stsc211741g00003 426 FunFam Non-specific serine/threonine protein kinase 316 420 - -
Stsc211741g00003 426 SUPERFAMILY Protein kinase-like (PK-like) 104 413 IPR011009 -
Stsc211741g00003 426 SMART serkin_6 122 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211741g00003 426 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 415 - -
Stsc211741g00003 426 ProSiteProfiles Protein kinase domain profile. 122 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211741g00003 Stsc-Chr211741 14154 19451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211741g00003 1 425 AGC Kinase Gene Family AT2G20470 79.673 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Stsc211741g00003 Pkinase 6.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211741g00003 K08790 - gmx:100779528 741.11