Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211734g00004 ATGATTAGTTGGGATGATCTATTGGTTGATGAAGAGAGTCTTTCATACAACAATGATGGACAAGTTTTTGTTGTTGATCAAGCTGGTAATGGTGATTCAACAACAGTTCAAGGTGCTGTTGATATGGTCCAACAAAACAACCCACAAAGAGTCAAGATTTATATATATCCCGGAATTTACAGAGAAAGAGTGCATGTGCCAAAAAACAAGCCATATATTTCATTTATAGGTAAACCAATGATGATGATGAATGCAACAGAGATTGGGAGTGGCATACTACTACCTGTTATTACAAATAGCACAAAGGCATCAGACAAAGGTTCATGGGAGGGGAAAGAATTAGGCATGTCTAATACAGCAACTCTTTGGGTTCAATCCGATTTCTTCTGTGCAACTGCTATTACTATTGAGAATTTGATAGAGAAAGATGGAGATAGAAGGCAGGCAGTGGCATTGAGGGTAGATAGTGATAAAGCTGTATTCTACCAAGTTAGGGTTGTTGGAGAACAGGACACTCTTCTAGATAACAAAGGAACCCACTATTTCTACCAAACTTACATCCAAGGATCTGTTGATTTCATTTGTGGCCAAGCAAAATCACTCTTTCATGAGTGTATACTATACTCAGTAGCTGAGGATTGGGGAGCAATTGCAGCTCATCATAGAAATTCAGCAGAAGAAGATACAGGATTCTCATTTGTTAATTGCAGAATCAAAGGAAATGGTGGTAGAATGTTGCTTGGGAGAGCTTGGGGAGAATACTCAAGAACAGTATATTCCTTCTGTGAAATGGATGATATCATTGACCCCATTGGTTGGAGTGATTGGCATGTTCCATCTAGACAACAGACTGCAGTATTTGGTGAGTATCAGTGTTATGGAAAAGGATCAAATAGAACTGGAAGGGTAGAATGGTCAAAAGAGTTGAGCAATGAAGAAGCTGTGCCTTTTCTTGGTACAAATTATATAAATGGAGATCAATGGCTTAGACTACAATAA 999 0.3844 MISWDDLLVDEESLSYNNDGQVFVVDQAGNGDSTTVQGAVDMVQQNNPQRVKIYIYPGIYRERVHVPKNKPYISFIGKPMMMMNATEIGSGILLPVITNSTKASDKGSWEGKELGMSNTATLWVQSDFFCATAITIENLIEKDGDRRQAVALRVDSDKAVFYQVRVVGEQDTLLDNKGTHYFYQTYIQGSVDFICGQAKSLFHECILYSVAEDWGAIAAHHRNSAEEDTGFSFVNCRIKGNGGRMLLGRAWGEYSRTVYSFCEMDDIIDPIGWSDWHVPSRQQTAVFGEYQCYGKGSNRTGRVEWSKELSNEEAVPFLGTNYINGDQWLRLQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211734g00004 332 FunFam Pectinesterase 18 331 - -
Stsc211734g00004 332 Gene3D - 21 332 IPR012334 -
Stsc211734g00004 332 SUPERFAMILY Pectin lyase-like 22 330 IPR011050 -
Stsc211734g00004 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 16 330 - -
Stsc211734g00004 332 Pfam Pectinesterase 24 326 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211734g00004 Stsc-Chr211734 8886 11592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211734g00004 21 283 Carbohydrate Esterase AT5G55590 61.887 6.39e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211734g00004 K01051 - gmx:100775690 497.278