Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc211734g00001 | ATGATGGAGTTTCATCATTTCTCATCATTCTCCCTCATCGTTCAAAGTCTTATCACTATCATCTTAATCTCTTTGATCCTAAAGTTGGGAAGAAAGATATTCAAAACTAATGGCAGCAGAGCATCAAACAATCTTCCACCAGGGCCATGGAAGCTACCAATTCTTGGAAGTATACACCATCTCATTGGTGATCTTCCACACCACAGCCTAAGAAAACTATCCCAAAAGCATGGCCCCATAATGCACATGCAACTCGGAGAGACATCAGCCATAGTTATTTCTTCACCTGAGATGGCCAAAGAGGTCTTAAAAACCCATGACACAGCCTTCTCTCAACGGCCTCGATTTGTCGCCATTGAAGCTCTAACTTATGGCTGGTCTAACCTTGCTTTTTCACCATATGGAAGCTACTGGAAGCAGATAAGAAAGATTTGCACCCTGGAGTTATTGAGTACCAAGCGGGTTAAATCGTTTCAGTTCATAAGAATGGAAGAGGTTTCAAGCTTAGTAAGATTTGTTTCCATGAACATTGGTTCACCTATCAACCTCACTGATGAGTTCTTGAACATGACATATAGCATCACTGCCAGAGCAGCATTCGGCGAGAAAACTAAGGATCAAGATGAATATGTGTCTATCATCAAGGAAACTTTAACATGGTCTCTAGCTTTAGGTGTTAGTAACTTGTTTCCTTCTCAGAAATGGCTGCATGTGATTAGTGGGGTGGAGAAGAAAGTGAAGGAGATGCATAGAACTGGTGATAGAGTTCTTGATGTTATCATAGCTGCAGCAACAAGAAAGAAAGATGGAGATAGTAGTCTTCTGTCTATTCTTTTGAGTCTCAGAGAAAATGGTACTTCTGAATTTCAATTGACAAATAACAATATTAAAGCTATTCTTCAGGACATGTTAATTGCAGGAGGTGAATCAACATCTTTAACTGTGGAATGGGTTTTCTCAGAGATGCTAAAAAATCCAAGAGTGCTGAAAAAAGCACAAGCAGAAGTTAGGGAAGTTTTTGGTAACAAAGATTATGTTGATGAGAAGGGTCTTGAAGAACTGAAATTTCTAAAAGCAGTCATTAAAGAAAGCATGAGACTACACCCTGCAACTCCATTGTTACTTCCAAAGGAGTGTCTTAAAAGTTGTGAGATCAATGGATACACAATACCAATTGGAACTCAAGTGTTTATAAATGCATGGGCAATTGGAAGAGATCCAAACTATTGGATTGAAGCAGAGAGTTTTTGTCCTGAGAGATTCTTGGATTGTGAAATTGACTACAGAGGTTCCCATTTTGAATTCATCCCATTTGGTGCAGGGAAAAGAATGTGCCCTGGGATATCATTTGCTATACATAATATTGAACTTCCACTTGCACAGCTACTGTATTATTTTGATTGGAATCTTCCCTTTGGAATTAGCCATGAGGATTTTGACATGACTGAACATTTTGGAAGTACTGTGAGAAGGAAAAATGACCTGTTTGCAATTCCCACTGTCCACCGTAATGTGCCCAATTGA | 1524 | 0.3924 | MMEFHHFSSFSLIVQSLITIILISLILKLGRKIFKTNGSRASNNLPPGPWKLPILGSIHHLIGDLPHHSLRKLSQKHGPIMHMQLGETSAIVISSPEMAKEVLKTHDTAFSQRPRFVAIEALTYGWSNLAFSPYGSYWKQIRKICTLELLSTKRVKSFQFIRMEEVSSLVRFVSMNIGSPINLTDEFLNMTYSITARAAFGEKTKDQDEYVSIIKETLTWSLALGVSNLFPSQKWLHVISGVEKKVKEMHRTGDRVLDVIIAAATRKKDGDSSLLSILLSLRENGTSEFQLTNNNIKAILQDMLIAGGESTSLTVEWVFSEMLKNPRVLKKAQAEVREVFGNKDYVDEKGLEELKFLKAVIKESMRLHPATPLLLPKECLKSCEINGYTIPIGTQVFINAWAIGRDPNYWIEAESFCPERFLDCEIDYRGSHFEFIPFGAGKRMCPGISFAIHNIELPLAQLLYYFDWNLPFGISHEDFDMTEHFGSTVRRKNDLFAIPTVHRNVPN | 507 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc211734g00001 | 507 | PANTHER | OS08G0105600 PROTEIN | 68 | 503 | - | - | |
| Stsc211734g00001 | 507 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | FunFam | Cytochrome P450 99A2 | 35 | 500 | - | - | |
| Stsc211734g00001 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506|GO:0016705 | |
| Stsc211734g00001 | 507 | Gene3D | Cytochrome P450 | 38 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | Pfam | Cytochrome P450 | 46 | 483 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 190 | 208 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | SUPERFAMILY | Cytochrome P450 | 46 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Stsc211734g00001 | 507 | CDD | CYP71-like | 76 | 495 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc211734g00001 | Stsc-Chr211734 | 26 | 1899 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc211734g00001 | 47 | 504 | Cytochrome P450 | AT3G26310 | 40.385 | 4.16e-131 | 388 |