Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211723g00003 ATGGAGAGGGTTGCAGAGCTGAAGGCACATCCACGGACCTTGCCTACCCTGGTGGAGTTATCAAATGCACACATGGCTGCAGCGAAAGAGGCTAGTCAGAGACGAAATGGGCCGGAGGTTGCAAGTGTCCGTGTGAATTATGGAAGAGAAGTGAATCAGTCAGCAAAAGCCAGGGATATGCCTGCCATGCGTCTGGCTTCCATAAGAGAAGTGGCTCAGTTGTCAAATGCTCGATTCTTTTTAGAAAGAGATGATATGGTATTCGAATCTCGGAGCTCTGAAGAATCTCTCTGCTTTGCCCCGGCACCACCTGGAACGTGGAAAGGAAAGGCCTCTTTACTAGAGCCGGAAGAACTGGTGCTTGATTTTGAGTCGTTGAAGGAAAGCAACGATTCATTTGAGGACAGTGGTTCTAGTTCATTTGCTGGTGCCAGTCATCCCCCGGAACCTGTTGATACAGATCTTATGAGAACAGTTTATGTACCAATAGGTCAAGGAAAATCCGAGGCTAGATGCTTAATGAAGAGCATGTCCATTAAGGGTCCTTTCATAGAAGATCTCTCAATTCATGTTCCTGCCAAAAAGCCAAGCCCAACTGTTGTGTCCCCTGAAGAAAGTCTTGTTGAAGAAGTTAATGACACGAGACATGTATCCTCGCCAATTTGGGGTCATCGAGCATCACAGAATACTGAGAACTCTATACTCCCTGCAGATTCTGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTAAGTCCACTTAGTAGCATTGATAGCACCGGCGTTGTCAGAGCAATGAGCATTGTTAATAGTTGTGCAAGTACATATCGGAGTGATGCAATGACTAGTGATGGCATGCTTAGTATAGACAGAAACTGCGATAGTACTAAAGGAAGCATAAGGGGGGATTCACTGGAGAGTGCAAAAACTAGTGTTAGTCGGCCAAGTGATAGCAGTGGCCTTAGTGATGACAGCAACTGGAGCAACATCACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAATGCTATCCTTGCCATCCGATTAAGGGATGGAATTCTAGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGCTGTGGCGATATTGGAAGTGTGTATCTCTCGGAGCTGAGCGGAACACGCTGTTATTTTGCAATGAAAGTTATGGATAAAGCGTCCCTAGCAGTCCGAAAGAAACTCACTAGAGCACAGACAGAGAGGGAGATACTGCAATTGCTGGATCATCCATTTCTACCAACTTTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTGGTGATGGAATACTGTCCAGGTGGTGATTTACACACTTTAAGGCAGCGTCAACCCGGAAAACATTTCTCAGAATATGCTGCACGCTTTTATGCTGCGGAGGTGTTGCTGGCTCTTGAATATCTTCACATGCTTGGAGTTGTATATAGGGACCTTAAACCTGAAAATGTGTTGGTTCGGGATGACGGTCACATAATGCTCTCCGATTTTGATCTCTCCCTTAGATGCACCTTTTCTCCAACTCTTATTAGAAGTGATGGCGATCCCAAACGTGGTGGTGCATTCTGTGTCCAACCTGTTTGTATTGAGCCGTCATCGGCATGCATCCAACCTGCATGTTTTATTCCCCGACTCTTCCCTCAGAAAAACAAAAAGTCACGGAAACCCAGAGTGGAGCCTGGGTTGCCATCAAGTACAATGCCAGAGCTTGTAGCCGAGCCAACTCAAGCTCGGTNNNNNNNNNNTGAATACCTTGCCCCCGAGATCATTAAAGGAGAAGGTCATGGCAGTGCAGTTGATTGGTGGACATTTGGAATATTCTTGCATGAGCTGTTATATGGCAAAACCCCTTTCAAAGGATCAGGAAACAGAGCTACACTCTTCAACGTAGTAGGCCAGCAGCTAAGGTTTCCTGAATCACCAGCAACTAGTTATGCCAGCAGGGACCTGATCCGGGGATTGCTGGTGAAGGAGCCACAGAATCGTCTTGGGGTTAAGAGAGGCGCAACTGAGATCAAGCAGCACCCCTTCTTTGAAGGTGTGAACTGGGCACTGATTAGGTGCAGCACGCCACCGGAAGTGCCAAGACCAGTGGAAACTGAGCCGCCACCGAAGTTTGGACCTATTGAGAATACTGCAGCTGCTGCTGCTGCTGCAGTTGGCAGCACTAGTAAGAGGATGGTAGGAACTGAGATGAGACCTGAGGGTAAATTTCTGGACTTTGAGTTCTTTTAG 2280 0.4654 MERVAELKAHPRTLPTLVELSNAHMAAAKEASQRRNGPEVASVRVNYGREVNQSAKARDMPAMRLASIREVAQLSNARFFLERDDMVFESRSSEESLCFAPAPPGTWKGKASLLEPEELVLDFESLKESNDSFEDSGSSSFAGASHPPEPVDTDLMRTVYVPIGQGKSEARCLMKSMSIKGPFIEDLSIHVPAKKPSPTVVSPEESLVEEVNDTRHVSSPIWGHRASQNTENSILPADSEEKECVWDASLPPSGNVSPLSSIDSTGVVRAMSIVNSCASTYRSDAMTSDGMLSIDRNCDSTKGSIRGDSLESAKTSVSRPSDSSGLSDDSNWSNITGSANKPHKGNDPRWNAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAVRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTFSPTLIRSDGDPKRGGAFCVQPVCIEPSSACIQPACFIPRLFPQKNKKSRKPRVEPGLPSSTMPELVAEPTQARXXXXEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEPPPKFGPIENTAAAAAAAVGSTSKRMVGTEMRPEGKFLDFEFF 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211723g00003 759 CDD STKc_phototropin_like 366 712 - -
Stsc211723g00003 759 MobiDBLite consensus disorder prediction 303 344 - -
Stsc211723g00003 759 SUPERFAMILY Protein kinase-like (PK-like) 349 717 IPR011009 -
Stsc211723g00003 759 FunFam serine/threonine-protein kinase D6PK-like 452 519 - -
Stsc211723g00003 759 ProSiteProfiles Protein kinase domain profile. 368 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211723g00003 759 MobiDBLite consensus disorder prediction 130 149 - -
Stsc211723g00003 759 SMART serkin_6 368 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211723g00003 759 Gene3D Transferase(Phosphotransferase) domain 1 452 519 - -
Stsc211723g00003 759 FunFam serine/threonine-protein kinase D6PK-like 592 711 - -
Stsc211723g00003 759 FunFam Serine/threonine-protein kinase D6PK-like 366 451 - -
Stsc211723g00003 759 Pfam Protein kinase domain 369 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211723g00003 759 Pfam Protein kinase domain 591 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211723g00003 759 MobiDBLite consensus disorder prediction 303 341 - -
Stsc211723g00003 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Stsc211723g00003 759 Gene3D Phosphorylase Kinase; domain 1 366 451 - -
Stsc211723g00003 759 Gene3D Transferase(Phosphotransferase) domain 1 596 711 - -
Stsc211723g00003 759 PANTHER FLIPPASE KINASE 1-RELATED 127 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211723g00003 Stsc-Chr211723 19912 23413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211723g00003 1 759 AGC Kinase Gene Family AT2G44830 64.773 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc211723g00003 Pkinase 5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211723g00003 - - gmx:100800019 1173.69