Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211722g00007 ATGCCCTCCCGTCCACCACCACTACCCCAACAACAACCACTCTCCACGCCAGCACCACCTCTCCACCACAACCACCACCACCACCACCACCAAATCATCCTCATCGGATCCCTCTCCCTCACCATCCTCCTCCTCCTCTCTCTCCTCTTCACTCTCCTCACCTTCCTCTACCGCAAACTCTCCCTCCACCGCACCACCCCTTTCCCCCACCACCACCACCACCACCACAACAACAACAACCACCGCCGCTACTCCTACGCCCTCCTCCGCCGCGCAACGAACTCCTTCTCCCCCTCCACCAAGCTCGGCCACGGCGGCTTCGGCTCCGTCCACAAAGCCACCCTCCCTTCCGGCGTAACCGTCGCACTGAAACTCATGGACTCGCCGGGCTCCCTCCAAGGCGAACGAGAGTTTCACAACGAACTCTCTCTCTGTTCGAATCTCAACTCGCCTTTCATTCTCTCTCTCTTGGGATTCTCTTCCGACAGAAGAAACCGCAAGCTCATACTCGTCTACGAGCTTATGAAGAATCGGAGCCTCCAAGACGCGCTCTTGGATCGCAAGTGTCCCGAGCTTATGAACTGGAAAACACGCTTCGACGTCGTCGTTTCGGTGGCCAAAGGGTTAGAGTACTTGCACCATTGTTGTGACCCTCCGGTGATTCATGGTGATATTAAGCCGAGTAATATTCTGTTGGATTCTGAGTTTAGGGCTAAAATTGGGGATTTTGGGCTTGCTAGGGTGAAGGAAGAGGTTGGGGTTGTGGTGGTGGAGGAGGAAGGTGGTGGCGTTGGTGGTTGTGGTGGTGGTGGTGGTGATGAGGAGTGTGATCGTGGTTCGGTGGTGGAGAGTGTGGCGACTGGGACTACTGCTGGGCTTGATTTGGAGAGGTCGCCGGAGAGTTTCACGGCGGTGAGGGTTTTGGATTCAGATGCGTCTCCTCCTCCGGCGGCGGGGACTTCGCCGGAGGTGGGGTTGGAGAAAGGTAGCGTCTTGTCGGATGGGTTGTTTGATGGGGTGAGTGTGGAGAGTGGGAATCAGAGGAGGAAGGGTGGCGGCGGTAATGGCGGTGGTTCTGGCAGGGATTGGTGGTGGAAACAGGACAATGGTGGAGGGTCAGAGTCAGGGAGGGTTAAGGATTATGTTATGGAATGGATTGGTAGTGAGATAAAGAAAGAAAGACCCAAGAATGAATGGGTTGCTTCTCCAAGTAGCATTAGTTGTGATGCAGAGAATANNNNNNNNNNAGATTCTGAGTCCAAAAACATCAAGAATAAGAATAAGAAGAAGAAGCAGAGAAAGAGGTTGGATTGGTGGGCTTCATTGGATGAGGAGAAGGTGAAGAATCAACAGCAGCAGAAGAAGGAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGCGAGGAGCTTGCGAAGAAGAGCAAGAAGAAGAAGAGGAGCCTTGATAACAATGGTGGTGAAGCTTGGTGGCAGAACAAAGATGAGGACATGGTGGTGGCTCAGGATCAGAAGAGGAAGAGGAAAAACAAGAGCAGCAGAGGGAGTATTGATTGGTGGCTTGATGGTTTGAGTGGTGAACTAATCAGAAACAACAATGGCAGAAGGAATAGCCAAGATTGGGTTAGTGGTGACATACCGAAGAGCGGCGGAATCAGCAGCACTCCGAGTATGAGGGGGACAGTGTGTTATATTGCTCCTGAGTATGGTGGCGGTGGCCAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTTCTTTTAGTTTTGGTTGCTGGGAGGAGACCCCTTCAGGTGACGGCGTCGCCAATCTCGGAATTTGAGAGGGCTAATTTGATTTCATGGGCTAGGCAACTTGCTCACAATGGAAGGCTCTTGGACCTTGTTGACACTAACATTCATTCATTGGACAAGGAACAAGCCTTGCTCTGCATCACAATTGCCCTGTTGTGCCTCCAGAGATCGCCCGCAAAGAGGCCGTCCATGAAGGAGATCGTCGGGATGCTCTCCGGGGAAGCTGACACGCCCCACTTGCCTTTCGAATTCTCGCCGTCGCCACCGTCGAATTTTCTCTTCAAGTCAAGGAAGAAGGCTCGGTGA 2109 0.5249 MPSRPPPLPQQQPLSTPAPPLHHNHHHHHHQIILIGSLSLTILLLLSLLFTLLTFLYRKLSLHRTTPFPHHHHHHHNNNNHRRYSYALLRRATNSFSPSTKLGHGGFGSVHKATLPSGVTVALKLMDSPGSLQGEREFHNELSLCSNLNSPFILSLLGFSSDRRNRKLILVYELMKNRSLQDALLDRKCPELMNWKTRFDVVVSVAKGLEYLHHCCDPPVIHGDIKPSNILLDSEFRAKIGDFGLARVKEEVGVVVVEEEGGGVGGCGGGGGDEECDRGSVVESVATGTTAGLDLERSPESFTAVRVLDSDASPPPAAGTSPEVGLEKGSVLSDGLFDGVSVESGNQRRKGGGGNGGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKNEWVASPSSISCDAENXXXXDSESKNIKNKNKKKKQRKRLDWWASLDEEKVKNQQQQKKEKNRKPREWWKEEFCEELAKKSKKKKRSLDNNGGEAWWQNKDEDMVVAQDQKRKRKNKSSRGSIDWWLDGLSGELIRNNNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTNIHSLDKEQALLCITIALLCLQRSPAKRPSMKEIVGMLSGEADTPHLPFEFSPSPPSNFLFKSRKKAR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211722g00007 702 MobiDBLite consensus disorder prediction 681 702 - -
Stsc211722g00007 702 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Stsc211722g00007 702 MobiDBLite consensus disorder prediction 1 23 - -
Stsc211722g00007 702 MobiDBLite consensus disorder prediction 407 434 - -
Stsc211722g00007 702 SMART serkin_6 96 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211722g00007 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Stsc211722g00007 702 MobiDBLite consensus disorder prediction 1 16 - -
Stsc211722g00007 702 Coils Coil 417 433 - -
Stsc211722g00007 702 FunFam Os07g0541700 protein 175 256 - -
Stsc211722g00007 702 SUPERFAMILY Protein kinase-like (PK-like) 74 690 IPR011009 -
Stsc211722g00007 702 Pfam Protein kinase domain 557 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211722g00007 702 Pfam Protein kinase domain 99 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211722g00007 702 Coils Coil 440 460 - -
Stsc211722g00007 702 PANTHER OS07G0586332 PROTEIN 1 702 IPR044576 -
Stsc211722g00007 702 ProSiteProfiles Protein kinase domain profile. 96 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211722g00007 702 Gene3D Transferase(Phosphotransferase) domain 1 533 680 - -
Stsc211722g00007 702 Gene3D Transferase(Phosphotransferase) domain 1 175 268 - -
Stsc211722g00007 702 MobiDBLite consensus disorder prediction 304 376 - -
Stsc211722g00007 702 Gene3D Phosphorylase Kinase; domain 1 68 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211722g00007 Stsc-Chr211722 45151 47679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211722g00007 530 672 Receptor kinase-like Gene Family AT3G58690 34.228 4.90e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Stsc211722g00007 Pkinase 4.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211722g00007 - - aip:107626015 1134.78