Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211722g00002 ATGCCACCAGGTCCTTACCCTTACCCTATAATAGGAAACATCTTAGAACTTGGCCAAAATCCCCATCAATCACTCTTTAACCTATCCAAGATATATGGTCCTCTAATGACCCTTAAGCTTGGAAGCTTGAATGCTGTAATCATTTCATCACCAGAGATAGCCAAAGAAGCATTAACCAAACATGATTTAGCATTTTCCAATAGGCAAGTCCCTGATTCCACTAGGGTACTTGGCCACCACAAAGTTTCTTTAGTGTGGTCACCAATTTGTGATCATTGGAGAACACTAAGGAAATTGTGTTCTACAAACATATTTTCGCCTCAAAAGCTAGAATCAACTAGCAAACTTCGCCACAAGAAGGTGGAAGAGTTGGTGAATTTTGTGAGGACTTGCTCTACAAATGGTGAAGGTATTGATATTGGTAAGGTTGTGTTCACAACAATAATGAATTCATTGTCCAACACCCTTTTCTCCATGGATTTTGCTCAATATGGAAATGGGGATGGCAATGGATTTCAAAATTTTAAAGGGATTGTAGAGTCCGTAATGATAGATTTTGGGAAGGCAAACGTCTCGGATCTTTTCCCTCTTCTTCGTTTCCTTGATCTACAAGGTATTCGACAAAGGGGAGAAGATGTTATTAAGAGGTTATTGATGATTTTTGGTGATATTTTCGATGAAAGAATGCAATTAAAAACTTTATCTGAAGAAGCTTACGATGATGTGTTAGATTCTTTCATTAACATCATCAAAGTAAATAGTTCAGCAGAATTAAGTCGTCATTATTTGCTACATTTATTTGTGGACTTATTTGTTGCTGGGATAGAAACAACAACAAGCACAATAGAATGGGCAATGACAGAATTGGTTCACAACCCTAAAAAGATGGCTAGAGTCAAAGAGGAACTCCTACAAGTCCTTGGCAAAGATGGCAAGCCACATGAATCAAACATCTCAGAATTTCATTACCTAAATGCAATTGTTAAGGAGACATTTCGGTTGCACCCACCAGTTCCCTTTTTACACCACAAATCGAACTCTATGGTAGAATTATGTGGCTTCAAAGTTCCAAAGGACACACAAGTTCTAATTAACTTATGGGCCATTGGAAGAAATTCTAGGACTTGGAGTGACCCAAATTCCTTTGTTCCGGAGAGGTTCTTAGAGTGCAAAATGGATGTTAAGGGTTTTGATTTTGAGCTGATTCCCTTTGGGGCTGGAAGAAGAATGTGTCCAGCACTTCCACTTGTTCATAGAACAGTGCATTTCATCTTGGCCTCTCTTTTGCACCATTTTGATTGGAAGATTGTTGATGGAATGAAGCCTCAAGAATTAGACATGAGCGAGAAGTATGGACTTACTATAAGAAAGGCTCAACCACTCAAACTCATTCCAATCCATACCAATTGTTAA 1413 0.385 MPPGPYPYPIIGNILELGQNPHQSLFNLSKIYGPLMTLKLGSLNAVIISSPEIAKEALTKHDLAFSNRQVPDSTRVLGHHKVSLVWSPICDHWRTLRKLCSTNIFSPQKLESTSKLRHKKVEELVNFVRTCSTNGEGIDIGKVVFTTIMNSLSNTLFSMDFAQYGNGDGNGFQNFKGIVESVMIDFGKANVSDLFPLLRFLDLQGIRQRGEDVIKRLLMIFGDIFDERMQLKTLSEEAYDDVLDSFINIIKVNSSAELSRHYLLHLFVDLFVAGIETTTSTIEWAMTELVHNPKKMARVKEELLQVLGKDGKPHESNISEFHYLNAIVKETFRLHPPVPFLHHKSNSMVELCGFKVPKDTQVLINLWAIGRNSRTWSDPNSFVPERFLECKMDVKGFDFELIPFGAGRRMCPALPLVHRTVHFILASLLHHFDWKIVDGMKPQELDMSEKYGLTIRKAQPLKLIPIHTNC 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211722g00002 470 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 325 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 Gene3D Cytochrome P450 1 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 FunFam Cytochrome P450 76C4 1 464 - -
Stsc211722g00002 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Stsc211722g00002 470 Pfam Cytochrome P450 2 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 467 - -
Stsc211722g00002 470 CDD CYP76-like 29 465 - -
Stsc211722g00002 470 SUPERFAMILY Cytochrome P450 2 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00002 470 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211722g00002 Stsc-Chr211722 7266 8772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211722g00002 1 466 Cytochrome P450 AT2G45550 47.034 2.87e-155 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211722g00002 - - aprc:113851120 614.764