Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211722g00001 ATGCCACCAGGTCCATACCCTTATCCCATAATAGGAAACATCTTAGAACTCAGCCACAAACCCTATGAATCACTCTTCCACCTTTCCAAAAAATATGGCCCAATAATGACTCTCAAGTTTGGAAGCTTAACCTCCATTGTTATCTCTTCACCCGAGATAGCCAAAGAAGCATTAACCAAACATGACTTAGCATTTTCCAATAGGCAAGTCCTTGATATCACTAGGGCACTTGATCACCACAAAGTGTCTATGGTGTGGTCACCCGTATGTGATCATTGGAGAACACTAAGAAAACTATGTTCTTCACACATATTCTCCCCTCAAAAGCTTGAATCAACTAGCGAACTTCGCCACAATAAGGTGCAAGAATTGGTGAACTTTGTTGAAACATGGTGTACCAAAGGTGAAAAAGAAGCTATTGATATTGATTTCAAGGAGATTATAGAGGGGATATTGGATGATGCTGGAAAGATTAACTTGGTTGATGTTTTTCCGATTCTTGGTTTTCTTGATCCACAATGCCTCCGAGGAAGGTGTGAAGACTCTTTTAAGAGGCTGTTGGAGATTTTTGATGATATCTTTGATAAAAGAATTCGGATGAAAGCATCTTCTGACAAGAGTTTTGAAAGAACTACTACTTGCTGTGATGATGTGCTAGATTCTTTTTTGGATCTTCTCAAAGAAAATAAATCTCAAGAACTGAATCGTCATTGTTTGTTACACTTGTTTCTGGACTTATTTATTGCTGGACTGGAGACAACAACAAGCACAGTAGAATGGGCAATGGCAGAGTTAATGCATAACCCTAATAAAATGAAGAAAGCCAAAGAAGAGCTTTTACAAATCCTTGGTAGAGATGTAAACCCCAAAGAATCAGACATACCAAAGTTACATTACTTGGAAGCAATTATAAAGGAAACACTTCGGTTGCACTCTCCAATTCCCATTTTATTCCACAAATCCAAGTTCGATGTAGAAATCAATGGCTTCAAAGTTCCCAAACATGCAGAGGTTTTAGTTAATTTATGGGCCATAGGAAGAGATTCAAGTATTTGGAAGATTGTGGATGACAAGAAATCTCAAGAATTAGACATGAGTGAAGAAGATGGTCTTACTGTACGTAGGGCTCAACCACTTCTACTCATTCCAATTCAAACCAATAAATATTAG 1170 0.3795 MPPGPYPYPIIGNILELSHKPYESLFHLSKKYGPIMTLKFGSLTSIVISSPEIAKEALTKHDLAFSNRQVLDITRALDHHKVSMVWSPVCDHWRTLRKLCSSHIFSPQKLESTSELRHNKVQELVNFVETWCTKGEKEAIDIDFKEIIEGILDDAGKINLVDVFPILGFLDPQCLRGRCEDSFKRLLEIFDDIFDKRIRMKASSDKSFERTTTCCDDVLDSFLDLLKENKSQELNRHCLLHLFLDLFIAGLETTTSTVEWAMAELMHNPNKMKKAKEELLQILGRDVNPKESDIPKLHYLEAIIKETLRLHSPIPILFHKSKFDVEINGFKVPKHAEVLVNLWAIGRDSSIWKIVDDKKSQELDMSEEDGLTVRRAQPLLLIPIQTNKY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211722g00001 389 Gene3D Cytochrome P450 1 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 SUPERFAMILY Cytochrome P450 2 353 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 143 353 - -
Stsc211722g00001 389 PRINTS E-class P450 group I signature 301 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 Pfam Cytochrome P450 141 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211722g00001 389 Pfam Cytochrome P450 2 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211722g00001 Stsc-Chr211722 2048 3975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211722g00001 1 353 Cytochrome P450 AT2G45550 41.818 7.56e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211722g00001 - K23810 ahf:112728864 551.206