Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211720g00006 ATGGGGATCGATCTGAAGGCTGGAGGTAAGAGCAAGAAGACCAAGAGAACAGCACCAAAGTCCAACGATATCTACCTCAAGCTCTTGGTCAAGCTTTACCGGTTCCTTGTGAGGAGAACTAACAGCAGCTTCAATGCTGTAATATTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCACTATCTTTGTCAAGACTGATTAAGTATACAAAGGGGAAGGAAGGGAAGATTGCTGTGGTGGTAGGGACTATAACTGACGATATTCGTGTATATGATGTTCCACCCTTGAAAGTTACAGCACTCAGGTTCACTGAGACTGCACGTGCAAGAATAGAGAAGGCCGGTGGTGAATGCTTGACATTTGATCAGTTGGCTCTTAGGGCCCCTCTCGGACAGAACACGGTCCTTCTTAGAGGCCCCAAGAATGCTCGTGAAGCCGTGAAGCACTTCGGTCCTGCGCCTGGTGTTCCACACAGCCACTCCAAGCCTTACGTGCGATCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGGAACAGCAAAGGGTTCAGGGTTTGA 564 0.4876 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTNSSFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEGKIAVVVGTITDDIRVYDVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211720g00006 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Stsc211720g00006 187 FunFam 60S ribosomal protein L18 1 187 - -
Stsc211720g00006 187 Gene3D - 1 187 - -
Stsc211720g00006 187 MobiDBLite consensus disorder prediction 151 187 - -
Stsc211720g00006 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Stsc211720g00006 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Stsc211720g00006 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211720g00006 Stsc-Chr211720 43853 46922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211720g00006 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 1.10e-104 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211720g00006 K02883 - gmx:100791657 357.451