Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211718g00003 ATGGCAAAATGGTTAAGTGTTATGGTTTTTGTTGTTATATTGCTTAAGGCAGAAGGAATTGATGTAGGACTCACTTATGTTCAAAGTGCTGTACCAAAAGGAGCTGTTTGCTTGGATGGAAGTCCACCAGCTTACCACTTTGATAAGGGGTTTGGAGCAGGAATTAACAACTGGATTGTTCACTTTGAGGGTGGAGGTTGGTGCAACAATGTCTCTGTTTGTCTCGACCGCAGGGACACTCGCTTAGGTTCATCTAAGAAAATGGATCAGACAGCTTCCTTTTCTGGATATCTAAGCAACAAGCAAAAATTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGATACTGTGATGGTTCATCATTCACCGGTGACGTCGAAGCAGTTGATCCTAAAACGAATTTGCACTTCAGAGGAGGAAGAATTTTTGTTGCTGTGATTGAGGACTTGCTAGCAAAAGGAATGAGAAATGCTCAAAATGCTATTCTTTCAGGATGTTCAGCAGGAGGATTGACAGCAATACTGCAATGTGATCGCTTCAGATCTCTAATTCCAGCAGGAGCTAAAGCCAAATGCATTTCAGATGCTGGTTATTTCATCAATGTAAAGGATGTCTCTGGAGCACAACACATTCAAGAGTTCTACAGTCAAGTTGTTGCAACACATGGGTCGGCCAAGAATTTGCCTGCGTCGTGCACTTCAAGACTGAGCCCAGGGCTGTGTTTTTTCCCAGAGAATGTGGTATCACAGATCAATACACCAATTTTCTTTGTGAATGCAGCATATGACTCATGGCAGATAAAGAACATATTGGCACCAGGTGTTGCTGATCCACACGGGCAATGGAGAGAATGCAAGCTAGACATAAAGAAATGCTCTTCTGGACAACTGAGCGTAATGCAAGGGTTCAGGACGAACTTCTTGAGCGCACTGAGTGGAGTGGGGAACTCTCCAGCAAGAGGCAAGTTCATAGATGGATGCTATGCTCACTGCCAGATGGGAACACAAGAGACATGGATGAGAGCAGACTCACCTGTGTTGGCCAAGACAACAATAGCAAAGGCTGTGGGTGATTGGTATTACCAAAGAAGGCCTTTCCATGAGATTGATTGCACTTACCCTTGCAATCCCACTTGCCATAACCGTATCTTTGATAACAACCAAAAAGATGATTGA 1182 0.4332 MAKWLSVMVFVVILLKAEGIDVGLTYVQSAVPKGAVCLDGSPPAYHFDKGFGAGINNWIVHFEGGGWCNNVSVCLDRRDTRLGSSKKMDQTASFSGYLSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVAVIEDLLAKGMRNAQNAILSGCSAGGLTAILQCDRFRSLIPAGAKAKCISDAGYFINVKDVSGAQHIQEFYSQVVATHGSAKNLPASCTSRLSPGLCFFPENVVSQINTPIFFVNAAYDSWQIKNILAPGVADPHGQWRECKLDIKKCSSGQLSVMQGFRTNFLSALSGVGNSPARGKFIDGCYAHCQMGTQETWMRADSPVLAKTTIAKAVGDWYYQRRPFHEIDCTYPCNPTCHNRIFDNNQKDD 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211718g00003 393 PANTHER NOTUM-RELATED 9 383 IPR004963 GO:0016787
Stsc211718g00003 393 Pfam Pectinacetylesterase 16 366 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211718g00003 Stsc-Chr211718 12631 15769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211718g00003 1 386 Carbohydrate Esterase AT4G19420 57.720 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211718g00003 K19882 - gmx:100781246 681.019