Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211712g00001 ATGAAGAACATGGCAACTCATCAATTGAATCCCATGTTCAAAACATCCATGGTGAAGAATTACAAGACACAACAACAACAACCACCAAGAACACAAAGGTTCCATGTCTTCAACAATGTAACGACATCTTCAACCACCACCACTACCATGAGTGGTAGGAAGCTCATAGAATCTGGCACAGTGAAAGCCATACTTCCTAAAGAAGCTTCAAGTGCCATGAACTCTGAAGGGTTTATTCTCCTTGATGTTAGGCCAAAATGGGAGGCAGAGAAGGCACGTGTTGTTGGGTCTGTGCACGTGCCAATCTTTGTTGAAGACACAGATAACAGCCCTGTAACATTACTTAAGAAATGGGTGCATTTTGGTTATATTGGATTGTGGACTGGTCAAAATCTAACCACATTGAACCCTGAGTTTCTTGGTCAAGTTGAAGTGGCTATTCCTGATAAGGCTTCCAAGGTGCTTGTGGCTTGTGGAGAGGGATTAAGATCAATGACAGCAGCTTCAAAGTTGTACAATGGAGGTTACAGAAATCTGGCATGGTTAGCCGGAGGCTTCGGCCGATCAAAAGACGATGACTTTCCGGCCATCGAAGGAACAGAGAAGTTGCAGTATGCTACAATTGGAGGAGTGTCTTACTACTTTCTTCAGTTGCTTATACTTCTACAAGCAGTGGGTAAATGA 684 0.4327 MKNMATHQLNPMFKTSMVKNYKTQQQQPPRTQRFHVFNNVTTSSTTTTTMSGRKLIESGTVKAILPKEASSAMNSEGFILLDVRPKWEAEKARVVGSVHVPIFVEDTDNSPVTLLKKWVHFGYIGLWTGQNLTTLNPEFLGQVEVAIPDKASKVLVACGEGLRSMTAASKLYNGGYRNLAWLAGGFGRSKDDDFPAIEGTEKLQYATIGGVSYYFLQLLILLQAVGK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211712g00001 227 CDD RHOD 68 186 - -
Stsc211712g00001 227 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 58 198 IPR036873 -
Stsc211712g00001 227 Gene3D - 60 206 IPR036873 -
Stsc211712g00001 227 Pfam Rhodanese-like domain 66 186 IPR001763 -
Stsc211712g00001 227 FunFam Rhodanese-like domain-containing protein 10 61 205 - -
Stsc211712g00001 227 ProSiteProfiles Rhodanese domain profile. 74 198 IPR001763 -
Stsc211712g00001 227 SMART rhod_4 64 195 IPR001763 -
Stsc211712g00001 227 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 14 226 IPR044614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211712g00001 Stsc-Chr211712 3970 6593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211712g00001 8 214 Sulfurtransferasese or Rhodanese AT3G08920 57.005 5.44e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211712g00001 - - gmx:100795945 305.449