Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211704g00010 ATGGAAGAAACATTTGTTCCCTTTCGCGGGATCAAGAATGACCTCAAAGGAAGAATTCTATGCTATAAGCAAGATTGGACTAGTGGATTCAAGGCAGGAATCAGGATACTTGCTCCAACTACATATATATTTTTTGCATCAGCTATTCCTGTTATCTCTTTTGGGGAGCAACTAGAGAGAAATACTGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCGACCGCACTATGTGGCATCATCCATGCAATCCTTGGAGGGCAACCTCTCCTCATACTAGGTGTAGCTGAGCCAACTGTTCTGATGTATACGTTCTTGTACGATTTTGCAAAGGATAGGAAAGATTTGGGGCAAAGGCTGTTCCTAGCTTGGGCTGGATGGGTGTGTGTTTGGACTGCCTTATTGCTATTTTTGTTGGCAATCCTTGGTGCATGCTCTATTATTAACAGATTCACACGGCTTGCTGGTGAACTATTCGGTCTGTTGATTGCGATGCTTTTCATGCAGCAGGCCATAAGGGGGCTAGTGGAGGAGTTTGGTGTACCACACCAAAGGGAAGATATCAATCAGACTGCACACCAATCCTCTTGGCTGTTTGGGAATGGAATGTTTGCCTTGGTTTTGTCGTTTGGCCTTCTGTTTACTGCGTTAAGAAGCCGTAAAGCTAGATCATGGCGTTATGGGACAGTTTATGTGTTAATGGGAATCCCAAGGCGGCTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTAATCAAGGATATGTTGAATGTGCCTCTCATTTATATAATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTATTACTTTGATCACAGTGTTGCATCCCAACTTGCTCAGCAGAAGGAATTCAATCTAAGAAGACCCTCTTCTTATCACTATGATCTTCTTCTGTTAGGCTTCTTAACCATATTGTGTGGACTTATTGGAATCCCTCCTTCCAATGGTGTTATTCCTCAATCTCCAATGCATACGAAAAGCTTAGCCACTCTAAAGCATCAGCTTTTGCGGAACAAGCTTACTCCATTAGCCCACCAAATACCACCTGCACTGGGGCTAAAAGAGTTGAAGGAATCCACAATTCAACTAGCCTCAAGTCATGGATATATTGATGCCCCTGTAGATGAGGTTGTTTTTGATGTGGACAAAGATGTTGATGACCTTTTGCCAGTTCAAGTTAAAGAACAGCGACTAAGCAATCTGCTACAAGCATTGCTGGTTGCAGCATGTGTCGCAGCCATGCCCCTTTTGAAGAAGATACCAACATCTGTGCTCTGGGGTTACTTTGCTTTCATGGCAATAGAAAGCTTGCCTGGAAATCAGTTTTGGGAGAGAATATTGTACCTGTTCACTGCTCCAAGCCGAAGATATAAAGTTCTGGAGGAACAGCATGCTGCCTGTATTGAAATTGTGCCATTCAAAACTGTTGTCACATTTACCTTGTTCCAGACAGCCTACTTGCTTCTCTGCTTTGGTTTAACCTGGATACCAATTGCCGGGGTTCTTTTCCCACTCTTGATCATGCTTCTCATCCCTGTAAGGCAATATTTCCTTCCTAAGTTTTTCAAAGGAGCTCATCTTCAAGATTTGGATGCTGCTGCTTACGAGGATGCGCCTGCTATCCCTTTCAACTTTTTGTTTGAAGATTCAAATGGTGGGGAAATTCTTGATGGAATTGTCACAAGAAGTCGTGGGGAAATTCGCATCACACAAAGCCCAAAAACATTAAGTTCAACTCCAACAACTTGCAGTGATATTATACCTGCTAATGGGAATACCTCAAAGACAGACCTCAAGTAA 1842 0.43 MEETFVPFRGIKNDLKGRILCYKQDWTSGFKAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHAILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGQRLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPHQREDINQTAHQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGTVYVLMGIPRRLFSPNPWSPGAYSNWTVIKDMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRRPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLTPLAHQIPPALGLKELKESTIQLASSHGYIDAPVDEVVFDVDKDVDDLLPVQVKEQRLSNLLQALLVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEEQHAACIEIVPFKTVVTFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKFFKGAHLQDLDAAAYEDAPAIPFNFLFEDSNGGEILDGIVTRSRGEIRITQSPKTLSSTPTTCSDIIPANGNTSKTDLK 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211704g00010 613 PANTHER ANION EXCHANGE PROTEIN 234 553 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc211704g00010 613 Gene3D Helical hairpin bin 18 60 - -
Stsc211704g00010 613 Pfam HCO3- transporter family 253 347 IPR011531 GO:0006820|GO:0016020
Stsc211704g00010 613 Pfam HCO3- transporter family 405 495 IPR011531 GO:0006820|GO:0016020
Stsc211704g00010 613 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Stsc211704g00010 613 MobiDBLite consensus disorder prediction 588 613 - -
Stsc211704g00010 613 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211704g00010 Stsc-Chr211704 52077 55625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211704g00010 1 595 Antiporters AT3G62270 70.758 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211704g00010 K24194 - gmx:100782542 984.941