Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211704g00007 ATGCCTAACGCATTGGTGATTGGCTCCCTTGTGCCTATTGTTGGTGGGGTGGCACTGGCTTCTGCTACTGAGGCTTCTTTCAATTGGACTGGATTTTGGAGTGCAATGGCTTCGAATTTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAAGGAGGAGGAATCAATGGACAACATTACCCTCTTCTCAATAATAACAGTTATGTCCTTCCTATTGACGGCACCTGTGACTCTCATCATGGAGGGTTTCATATTTTCCCCTTCTTATCTGCAATCTGCTGGATTAAATGTTAAACAAATTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATACCAGCAGGTTGCTTACATGATATTGCAGAGGGTGTCACCTGTTACTCACTCGGTGGCAAATTGTGTTAAGAGAGTTGTGGTTATTGTGAGCTCTGTCTTGTTCTTCCGTACACCTGTCTCACTTGTGAATGCAATTGGCACTGCTATAGCTCTTGCTGGTGTTTTCTTCTACTCGAGGGTGACCAGAATTAAACCAAAAGCTACTTAG 561 0.4296 MPNALVIGSLVPIVGGVALASATEASFNWTGFWSAMASNLSNQSRNVLSKKLMVKEEESMDNITLFSIITVMSFLLTAPVTLIMEGFIFSPSYLQSAGLNVKQIYIRSLLAALCFHAYQQVAYMILQRVSPVTHSVANCVKRVVVIVSSVLFFRTPVSLVNAIGTAIALAGVFFYSRVTRIKPKAT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211704g00007 186 SUPERFAMILY Multidrug resistance efflux transporter EmrE 100 177 - -
Stsc211704g00007 186 PANTHER SOLUTE CARRIER FAMILY 35 2 179 - -
Stsc211704g00007 186 Pfam Triose-phosphate Transporter family 3 176 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211704g00007 Stsc-Chr211704 29686 31150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211704g00007 2 184 Antiporters AT5G33320 76.503 2.15e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211704g00007 K15283 - gmx:100780925 301.212