Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211704g00006 ATGTGGTGTTTCAATCTTTACAAGAGGCCAAAACTCAGTGCTGCTCAGCTTGCAGCAATATTGCCACTGGCTGTGGTACATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGCAAAGTTGCTGTGTCTTTCACACATACAATAAAGGCAATGGAGCCTTTCTTTTCTGTGATCCTTTCTGTTATGTTCCTTGGAGAGATGCCTAACGCATTGGTGATTGGCTCCCTTGTGCCTATTGTTGGTGGGGTGGCACTGGCTTCTGCTACTGAGGCTTCTTTCAATTGGACTGGATTTTGGAGTGCAATGGCTTCGAATTTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAAGGAGGAGGAATCAATGGACAACATTACCCTCTTCTCAATAATAACAGTTATGTCCTTCCTATTGACGGCACCTGTGACTCTCATCATGGAGGGTTTCATATTTTCCCCTTCTTATCTGCAATCTGCTGGATTAAATGTTAAACAAATTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATACCAGCAGGTTGCTTACATGATATTGCAGAGGGTGTCACCTGTTACTCACTCGGTGGCAAATTGTGTTAAGAGAGTTGTGGTTATTGTGAGCTCTGTCTTGTTCTTCCGTACACCTGTCTCACTTGTGAATGCAATTGGCACTGCTATAGCTCTTGCTGGTGTTTTCTTCTACTCGAGGGTGACCAGAATTAAACCAAAAGCTACTTAG 762 0.4265 MWCFNLYKRPKLSAAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSVMFLGEMPNALVIGSLVPIVGGVALASATEASFNWTGFWSAMASNLSNQSRNVLSKKLMVKEEESMDNITLFSIITVMSFLLTAPVTLIMEGFIFSPSYLQSAGLNVKQIYIRSLLAALCFHAYQQVAYMILQRVSPVTHSVANCVKRVVVIVSSVLFFRTPVSLVNAIGTAIALAGVFFYSRVTRIKPKAT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211704g00006 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 167 244 - -
Stsc211704g00006 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 4 88 - -
Stsc211704g00006 253 Pfam Triose-phosphate Transporter family 1 243 IPR004853 -
Stsc211704g00006 253 PANTHER SOLUTE CARRIER FAMILY 35 12 246 - -
Stsc211704g00006 253 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 1 252 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211704g00006 Stsc-Chr211704 29686 31823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211704g00006 1 251 Antiporters AT5G33320 79.681 8.34e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211704g00006 K15283 - gmx:100780925 420.239