Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211701g00004 ATGGCGGCGAAAGTGTCGAAGGCGGCGTTCGACGCCAAGATGTGGAAGCTACTGAGGGAGTACAGCCAGGTCCTGGTGGTTACCTCCGATAACGTCGGTTCCAACCAGATCAACGGCATTCGGAGGGGTTTGAAGGGCGATTCCGTGGTCGTCATGGGCAAGAACTCCATGATGAGACGCTCTTTCATGCTCCAAGCTCAGAAAACTGGAAACAATTCTTTTCTCAACCTTATCCCTCTTCTCAGGGGAAATGTGGCGTTGATTTTCACGAAAGAGGATATGAAGGAGGTTAGCAATGAGGTTGCCAAGTTCAAGGTTGTTGATCCTCTTCTTATGTGCCCCAAGTACTTATCATATGAATCGTACCGCAATTGTTCCTACATGCAATCTGGACAGTTACCTTTGGGCCTCAAGTGTTGTAACCAGCAGTCGTCGCAGGATTCTGAGCCTTTTCTTGTGTCCTCAAAATTCACACCGCACCAGCACTGTGTCATGATGAGATCAAAACAGTTCTTGGCAATGAGTGTATGGTCCCCACTTCTCCTTTTAGCTGGTAGCGTGTGA 564 0.4858 MAAKVSKAAFDAKMWKLLREYSQVLVVTSDNVGSNQINGIRRGLKGDSVVVMGKNSMMRRSFMLQAQKTGNNSFLNLIPLLRGNVALIFTKEDMKEVSNEVAKFKVVDPLLMCPKYLSYESYRNCSYMQSGQLPLGLKCCNQQSSQDSEPFLVSSKFTPHQHCVMMRSKQFLAMSVWSPLLLLAGSV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211701g00004 187 Gene3D - 3 118 IPR043141 -
Stsc211701g00004 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 3 109 - -
Stsc211701g00004 187 Pfam Ribosomal protein L10 5 104 IPR001790 -
Stsc211701g00004 187 SUPERFAMILY Ribosomal protein L10-like 6 105 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211701g00004 Stsc-Chr211701 22401 24261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211701g00004 1 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 61.947 2.87e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211701g00004 K02941 - twl:120015003 145.976