Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc2116g00005 | ATGCACGACATGCTGTCGGCGATAGAGAGGTACAAGGCGACGTACCTGCCGCTGGTGCCGCCGATTCTGGTGGCGATGCTCAACAACGCGGAGGCGATTAAGGGGAAGTATGATTTGAGGTCTTTGCATTCGGTGCTTTCGGGTGGAGCTCCGCTTAGCAAAGAGGTGATTGAAGGCTTCGTGGAGAAGTACGGCACGGCGGGGCTCCTCTCTCCGGGAACTGAGGCTAAGGTTGTTGATCCTGACTCCGGCGTCGCCCTTCCCGTGAACCGGACCGGTGAGCTTTGGCTGAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAAGAAGCAACGGCATCTACACTTGATTCAGAAGGATGGTTAAGAACAGGGGATGTTTGCTTCATCGAGAATGATGGCTTCATATTTATTGTGGATAGGTTGAAAGAGCTCATCAAGTACAAGGGATATCAGGTGCCTCCAGCAGAACTAGAGGCCTTGTTGCTCACACATCCCTCTATTGCTGATGCTGCTGTCATCCCCTTCCCAGATAAGGAGGCTGGCCAAATTCCAATGGCCTATGTTGTAAGAAAGCCTGGAAGCACCATTTCAGAGAAGCAAGTCATGGATTTTGTTGCAAATCAGGTGGCTCCATACAAAAGAATTCGAAAGGTTGCTTTTATATCTTCTGTACCCAAAAATCCATCTGGCAAAATTCTAAGGAAGGATCTCATTAAGCTTGCAACCTCTAAACTCTGA | 744 | 0.4933 | MHDMLSAIERYKATYLPLVPPILVAMLNNAEAIKGKYDLRSLHSVLSGGAPLSKEVIEGFVEKYGTAGLLSPGTEAKVVDPDSGVALPVNRTGELWLRGPTIMKGYFSNEEATASTLDSEGWLRTGDVCFIENDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPSIADAAVIPFPDKEAGQIPMAYVVRKPGSTISEKQVMDFVANQVAPYKRIRKVAFISSVPKNPSGKILRKDLIKLATSKL | 247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc2116g00005 | 247 | Gene3D | - | 1 | 70 | - | - | |
Stsc2116g00005 | 247 | FunFam | 4-coumarate--CoA ligase 2 | 145 | 246 | - | - | |
Stsc2116g00005 | 247 | SUPERFAMILY | Acetyl-CoA synthetase-like | 3 | 244 | - | - | |
Stsc2116g00005 | 247 | Pfam | AMP-binding enzyme | 63 | 149 | IPR000873 | - | |
Stsc2116g00005 | 247 | Pfam | AMP-binding enzyme C-terminal domain | 158 | 233 | IPR025110 | - | |
Stsc2116g00005 | 247 | PANTHER | LONG-CHAIN-FATTY-ACID--COA LIGASE | 2 | 241 | - | - | |
Stsc2116g00005 | 247 | Gene3D | - | 143 | 246 | IPR045851 | - | |
Stsc2116g00005 | 247 | Gene3D | Luciferase; Domain 3 | 71 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc2116g00005 | Stsc-Chr2116 | 7796 | 9371 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc2116g00005 | 1 | 247 | Monolignol Biosynthesis Gene Families | AT1G20500 | 62.455 | 1.36e-124 | 363 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc2116g00005 | K10526 | - | gmx:100811344 | 427.172 |