Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211699g00009 ATGAGTTGCAACGGGTGCCGTGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCCCCGAGGCCCAAGGCCACGCCACCGTTTTCGTAGCCAAATTCTTCGGCCGCGCTGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCCGCTCTCTTTCAGTCTCTACTCTTTGAAGCGTGTGGGCGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTGCTGTGGACCGGAAACTGGCACGTGTGCCAGGCCGCCGTTGAGACGGTGCTCCGAGGAGGATCCCTCAGGCCCATGCCGGAGCTACTCGGTCTCGACGCGCCTGCTCCCGTCGCCCTTGACGACGGTTCAGAAGGGGAAGTCACGTGCGGCGACGCGCGGAGGCTGCGAGATCCGAACCCGAACATAAGGTTCACGAGCACCCGATCCGGCAAAGGAAGTTCCGGCGGGAAGCGGAAGCGATCGGAGGAGTCGATGATGACGACGGCGGATCTTAACCTTCGGCTGACGCCGAGTTTCATGCAGAGCGGCTGCCGGCAGGAAATTCGGCGGCCGGGAACGCCGTCGATGAATTCGGAGGAATCGGTGACGACGACAGCCCGTTTGGATAGCGGACTCGGAGATAATTACGGTCACGGCGGAGAACGGAAAGTCCTCAACCTTTTCATATGA 705 0.5986 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPAPVALDDGSEGEVTCGDARRLRDPNPNIRFTSTRSGKGSSGGKRKRSEESMMTTADLNLRLTPSFMQSGCRQEIRRPGTPSMNSEESVTTTARLDSGLGDNYGHGGERKVLNLFI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211699g00009 234 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Stsc211699g00009 234 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Stsc211699g00009 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 210 - -
Stsc211699g00009 234 MobiDBLite consensus disorder prediction 196 215 - -
Stsc211699g00009 234 MobiDBLite consensus disorder prediction 192 219 - -
Stsc211699g00009 234 MobiDBLite consensus disorder prediction 120 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211699g00009 Stsc-Chr211699 57627 59342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211699g00009 1 233 AS2 family AT3G49940 58.103 6.52e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc211699g00009 LOB 8.8e-26 No_clan