Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211699g00009 | ATGAGTTGCAACGGGTGCCGTGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCCCCGAGGCCCAAGGCCACGCCACCGTTTTCGTAGCCAAATTCTTCGGCCGCGCTGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCCGCTCTCTTTCAGTCTCTACTCTTTGAAGCGTGTGGGCGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTGCTGTGGACCGGAAACTGGCACGTGTGCCAGGCCGCCGTTGAGACGGTGCTCCGAGGAGGATCCCTCAGGCCCATGCCGGAGCTACTCGGTCTCGACGCGCCTGCTCCCGTCGCCCTTGACGACGGTTCAGAAGGGGAAGTCACGTGCGGCGACGCGCGGAGGCTGCGAGATCCGAACCCGAACATAAGGTTCACGAGCACCCGATCCGGCAAAGGAAGTTCCGGCGGGAAGCGGAAGCGATCGGAGGAGTCGATGATGACGACGGCGGATCTTAACCTTCGGCTGACGCCGAGTTTCATGCAGAGCGGCTGCCGGCAGGAAATTCGGCGGCCGGGAACGCCGTCGATGAATTCGGAGGAATCGGTGACGACGACAGCCCGTTTGGATAGCGGACTCGGAGATAATTACGGTCACGGCGGAGAACGGAAAGTCCTCAACCTTTTCATATGA | 705 | 0.5986 | MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPAPVALDDGSEGEVTCGDARRLRDPNPNIRFTSTRSGKGSSGGKRKRSEESMMTTADLNLRLTPSFMQSGCRQEIRRPGTPSMNSEESVTTTARLDSGLGDNYGHGGERKVLNLFI | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211699g00009 | 234 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Stsc211699g00009 | 234 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 101 | IPR004883 | - | |
Stsc211699g00009 | 234 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 210 | - | - | |
Stsc211699g00009 | 234 | MobiDBLite | consensus disorder prediction | 196 | 215 | - | - | |
Stsc211699g00009 | 234 | MobiDBLite | consensus disorder prediction | 192 | 219 | - | - | |
Stsc211699g00009 | 234 | MobiDBLite | consensus disorder prediction | 120 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211699g00009 | Stsc-Chr211699 | 57627 | 59342 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211699g00009 | 1 | 233 | AS2 family | AT3G49940 | 58.103 | 6.52e-84 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Stsc211699g00009 | LOB | 8.8e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211699g00009 | - | - | gmx:100816189 | 377.867 |