Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211699g00008 ATGACGCAATTCACCACAAAAATAGCACCACCTTTGCACCAATACAACTTCTCTTTTTCAAACCCTAATAATCATAATATTATGAACAAGAACCAACAACAAATTCCAAGAACAAGGCAATGGCCTGCCTTCCCTACACCTAAGTCCCTACCTACTTCAACCACCTTCGGTGACGCCACTTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCCATTGAAACCAACGACGTAACCCTCGCTCAGCAGATTCTCTGGGTCCTCAACAACATAGCTCCCCCTGACGGCGATTCTAACCAGCGACTCGCTGGAAGCTTCCTCAGAGCCCTAACCGCACGCGCCGCTAACACAGGTAGCTCCAAGATGCTCGCCGCCGTCGCTGATGCTGCTGCTAACCGTACCAGCCTCGCCATCGAAACGCACAGATTCTCCGTCATCGAGTTGGCAAACTTCGTTGACCTCACTCCATGGCACCGGTTCGGTTTCACCGCCGCCAACGCCGCCATTTTAGAAGCCACGGAAGGGTTCTCGGTGATTCACATCGTGGATTTGAGCTTGACGCACTGCATGCAGATCCCGACGCTGATCGACGCCATCGCTGGCCGCCATGAGGTTCCACCTATAATCAAGCTCACGGTTCCCGGTGCCGCTTCCAGAGAAGGTAACATCAATATCCCTCCATTACTCGATCTATCGTATGAGGAATTAGGTGCGAAGTTGGTCAACTTCGCTAGGTCGAAGAACGTGGTAATGGAATTCAGGGTTGTTTCTTCGAGCTACGCTGATGGATTCGCCTCTTTAATCGAACACCTGCGAATGCAACATATAGTTTACGCTGCTGAAGGTCATCATCCAAACGAAGCTTTGGTTATTAACTGTCACATGATGCTTCATTACATTCCCGATGAAACTGCACTAGTTCATCATCATCATGAAACGGATTCGAATTTAAACCCTTTCATTGTTCATGATTACTCATCTTCTTGTTCTTCTTCGTCATCATCGCCTTCGTCGTTGCGGTCAATGTTTCTTAAGGCAGTTCGGAGCTTAGAACCTACGATTATGGTTTTGGTAGATGAGGACGCGGATTTGATATCAAATAACTTGGTGTGTAGGCTAAGATCTGCGTTCAATTATCTGTGGATACCGTATGACACGGTGGACACGTTTCTTCCTCGAGGGAGCAAGCAAAGGCAGTGGTATGAGGCTGACATATGTTGGAAGATTGAGAACGTGATAGCGCATGAAGGGGCTGAGAGAGTTGAGAGGGTTGAGCCCAAGAGCAAGTGGGAGCAAAGAATGAGGAATGCGAGCTTTCATGGGATTGGATTCAGTGATGAGTCGGTTTCTGAGGTGAAAGGGATGCTGGATGAACATGCTGCTGGTTGGGGTGTAAAGAAGGAAGATGATAATCTTATTCTCACTTGGAAAGGCCACAATGTTATCTTTGCCTCTGCTTGGTTACCTGCTTAG 1473 0.4813 MTQFTTKIAPPLHQYNFSFSNPNNHNIMNKNQQQIPRTRQWPAFPTPKSLPTSTTFGDATCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLAGSFLRALTARAANTGSSKMLAAVADAAANRTSLAIETHRFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIAGRHEVPPIIKLTVPGAASREGNINIPPLLDLSYEELGAKLVNFARSKNVVMEFRVVSSSYADGFASLIEHLRMQHIVYAAEGHHPNEALVINCHMMLHYIPDETALVHHHHETDSNLNPFIVHDYSSSCSSSSSSPSSLRSMFLKAVRSLEPTIMVLVDEDADLISNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGAERVERVEPKSKWEQRMRNASFHGIGFSDESVSEVKGMLDEHAAGWGVKKEDDNLILTWKGHNVIFASAWLPA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211699g00008 490 ProSiteProfiles GRAS family profile. 53 488 IPR005202 -
Stsc211699g00008 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 476 IPR005202 -
Stsc211699g00008 490 Pfam GRAS domain family 62 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211699g00008 Stsc-Chr211699 46409 47926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211699g00008 44 489 GRAS Transcription Factor Family AT3G49950 55.234 3.73e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc211699g00008 GRAS 1.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211699g00008 - - adu:107487668 910.598