Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211698g00007 ATGAGGATGTTGCCTGTTTGCTCAGCAACCCCAAGCTACTCCTCTTCTTCCCAGATTCCCTTGTTTGGGGGATTGCAACCCTTGTACCCGATTCGAAAGGATCTTGAGAGCAGATGTGTGGGAGAAGAAGGTGTGAATCTGAGTTTCCAGTATGGAACTCACACTCACTCGGCAAAGAACTCCTTTTCAGTACAAGCTACAAAGACCGGGTCGGGTTGTTTGATTTTTCCAAGTGAACCAGGGTACCTTACTAACACATGGGGTTATTTGTCAACTGTGCCAGAGGATGTTGTGGACTTTGCAGAGCAGTCAGCTGAAGGATCTAACACATTAACAGTGCCAGTGCAACCAGAAACACTATCAAGTACTGATGTAATACCAGATAATTTCACGTCTTCATCTGGGCCTGATTCATATAATGTGGACAATGAATCAGTAGCCAGTGCAAAAGCTAGTGTCGGTGATCTCGTTGCTGGGATCAATGACTCAATCAATGGCTCAATTAATAAGGGAGAAACTGTGTTACGGAACTCACTAGATACAGTTACTTCTTTTATAGATTCTATTGTTAAAAATGCTACTTCATCTGCAGATAATGCTTTTAGTAAGGCATTTTCTTCTGTAGATAAAACGGGGGAACTAACAAAGCAGAAAATTACTGGCTTTTCAAGTGAGCTAAGTGGAATAACTAACAAGGTACCTGCCGTGGTTGTTGATGTGTTGCGCCGCACAATCGTAGCTGTAGAGAGTTCATTAGTAAGTGGAGCATCATACACTATCTATCTTTACGGGTCAGCCAAGGAGCTCCTTCCTCCAGGGATTAGGGATACAGTCAATGTATATGAAGACAAAGCAACAGAAATATTGAGGCCTATTGGGCCTGCATCTCAACAGGTATACATGGCTATATATTCGCTGGAGAAGAATCTTGGGTTGGATCCAAATGACCCAATTGTTCCATTTGGTGTTTTCGTGGGCTCTTCAGCAACAATATGGGCTTTTTATTGGTTGTGGACATATGGTGGTTACTCTGGAGATTTATCCCCTAAATTGGCAATGGAGCTTTTGGCTGGGGACAAAGATGCAACACTGATAGATGTTCGCAATGAGGATTTGCTAGAGAAAGATGGTATTCCTGATATTCGACGGTCTGCTCGGTTTAGATATGCAAATGTAACTCCACTTGAGGTCGATGGCACTTTAAGGAAGTTGCTGAAAAGTGGTAGAGACCTTGATGATTCCTTGGTCGCTGCTATTATTCGAAATTTGAAGATTGTTAAGGACGGTTCCAAGGTTATCATTATGGATGCTGATGGTACTCGTTCTAAAGGCATTGCACGTTCCTTGAGGAAACTTGGGGTCAAGAATTCATACATGGTTCAAGGTGGCTTTCAGTCTTGGGTGAAAGAAGGTCTCCGCATCAAGGAGCTTAAACCTGAGACAGCACTTACCATATTTAATGAGGAAGCTGAAGCAATTCTGGAGGACGTTAGTCCTTCTCCTCTTCAACTTCTAGGTTATGGCTTGGCTGTTATTGCTGGGTTCTATGGAATATTAGAGTGGGAGAAGACATTGCAGTTGATTGGAGCAGTTGGCCTTGGTTTGACCGTCTTTGTGCGTGTCTCTTCATATGAAAGCTCAGAAGATTTGAAGCAAGATGTGAGGTTATTGCTTGCTCCTGTTAGAGTCGGAGCTCAAGCGGTCTCATGGGCTGCCGGAAAATTAGATTCGAACCGCATAGGGCTTCCTACATCACCTTCATCATTAGATGTTCAGAACCGAGTACTACAAGCTGTCGCGAAACACGAATCTCAACCATCTGACATTGAAGGGAACAACCAAGATCAATCTCCTGAGAAGACAGTTTCTCTCAATCAGAATGTATGA 1887 0.433 MRMLPVCSATPSYSSSSQIPLFGGLQPLYPIRKDLESRCVGEEGVNLSFQYGTHTHSAKNSFSVQATKTGSGCLIFPSEPGYLTNTWGYLSTVPEDVVDFAEQSAEGSNTLTVPVQPETLSSTDVIPDNFTSSSGPDSYNVDNESVASAKASVGDLVAGINDSINGSINKGETVLRNSLDTVTSFIDSIVKNATSSADNAFSKAFSSVDKTGELTKQKITGFSSELSGITNKVPAVVVDVLRRTIVAVESSLVSGASYTIYLYGSAKELLPPGIRDTVNVYEDKATEILRPIGPASQQVYMAIYSLEKNLGLDPNDPIVPFGVFVGSSATIWAFYWLWTYGGYSGDLSPKLAMELLAGDKDATLIDVRNEDLLEKDGIPDIRRSARFRYANVTPLEVDGTLRKLLKSGRDLDDSLVAAIIRNLKIVKDGSKVIIMDADGTRSKGIARSLRKLGVKNSYMVQGGFQSWVKEGLRIKELKPETALTIFNEEAEAILEDVSPSPLQLLGYGLAVIAGFYGILEWEKTLQLIGAVGLGLTVFVRVSSYESSEDLKQDVRLLLAPVRVGAQAVSWAAGKLDSNRIGLPTSPSSLDVQNRVLQAVAKHESQPSDIEGNNQDQSPEKTVSLNQNV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211698g00007 628 MobiDBLite consensus disorder prediction 602 628 - -
Stsc211698g00007 628 CDD RHOD 352 468 - -
Stsc211698g00007 628 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 332 474 IPR036873 -
Stsc211698g00007 628 Pfam Rhodanese-like domain 349 469 IPR001763 -
Stsc211698g00007 628 Gene3D - 343 483 IPR036873 -
Stsc211698g00007 628 SMART rhod_4 348 473 IPR001763 -
Stsc211698g00007 628 ProSiteProfiles Rhodanese domain profile. 358 476 IPR001763 -
Stsc211698g00007 628 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 625 IPR044690 GO:0009704|GO:0071277|GO:0090333
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211698g00007 Stsc-Chr211698 38580 52989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211698g00007 320 437 Sulfurtransferasese or Rhodanese AT5G23060 26.984 4.63e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211698g00007 - - gmx:100786123 943.725