Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211697g00011 ATGGCTGTGGCTGCTACAGCCATTGCTGTGCTGCTTATTGTTGCTGTGATTTTCTTCTACTTCAAGAAATTTGCTTGCTCTTGGCGTTACCGCCACAGACACAGAGTTGCGGCGAGTTTTCGAAGAGAAGCAGGATTTAACAATGAGGATATAAGGAAAGTTGATAAGAATGTGAAAGGTTTACTTGCTGATGAAGAAAATGGGATTGATATTCTGTATATGGTGGAAACACAAGGAAGGCATTTCAAAACCAGTTTCCCAACTAGAATATTCAATCCTAGTTATGAACATAATCAAGAAGAAGAAAAGAGAATAGATGTAATGGTTCAAAGATCCCTGCATTATGAGACTCAAGAGGTTCCATTGCTATGTGAATCTCCAGGTTCAGCTTTGATGGTTCATAAGGATTTAGTTAAGCAGGTACAACCACCATCACCATCACCACCACCACCTCCTCCTCCTCCACCACCACCGCCTTCTCCTCCAAGAAACAAAATTCCAAAAGCATCATCACCTGTGCCTTCAGCTCCTATTATGAACAGAGAAAGTGGAGCTTCAGCTCAAAAGAGCAGTGGCTTCATTTCATCATCAAAACCACCACCACCACCTAAAAGGAAATCCAACATGGAAAACAACACAGGCTCAAGAGATAAGGGTGCTAGCCAAACAAGGCTTAGGCCTCTTCATTGGGATAAGGTTGTAGCTAATGTTGATCATTCTACAGTGTGGGATCACATCAATGATGGCTCTTTCAGGTTTGATGATGAACTGATAGAAACACTCTTTGGATATTCAACCAACAATCAAGCCAATGAAAGAAACATTTGTCATGCTTCTTCAGCTCAGATATTCCTTGTGGACCGTCGAAAATCCCAAAACACATCAATTGTGCTAAGGTCTCTAGAAATTTCTCGAAAGGAAATTATGGATGCAGTCCTTGATGGCCAAGGACTCAGCCTTGAGACACTTGAAAAACTCACTAAGATAGCTCCTGCACAAGAAGAAGAAGACAAAATCATCCAATTCAGTGGAAATCCGGATAAACTTGCTTATGCTGAGTCATTCCTCTACTGCATCCTGAAATCGGTTCCAACAGCATTCATTCGCCTAAAAGCAATGCTTTTCAGATCAAATTATGATTGTGAAATTGTTCAGCTTAAAGAAAACTTACAAACACTTGAAAAGGGTTGCAAGGAGATGAGGTCTAGTGGCTTGTTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAACGCCGGAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTGAAAAGCATTGATGGGAAGACTAGTTTGCTTCACTTCATTGTGGAGCAGGTGGCTCAGTCAGAAGGAAGGAGAGAAGCTATGAATCAAAAGCGTAACATTCCAAAGATCAATTGTGATATAAGCAACTCCAATGCAACACATTCAGATAGTGACAATAATAATAACAACCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATTCTTGGTTTAGAAGTGTTATTGGGAGGTATAAAGGATCAGTTATCTGAAGTAAAGAAAGCAGCAACAATTGATCATCAGAATTTCATTAGCATGTTCTGCACTCTCAATGCTCATGTTGGCGAAATTCGAGAAATCATAACAAAATGCTGTGGTGACAATAAGGGAGGTGGATTTGCTATGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGAGGAACACCTTAGGATAATGGAGCTTGTGAAGAAAACCAATGAATATTATCTAGGAGGTGGAGGAGGATCCAGTGACAATAATAACATGTCAAACCCCTTTGAACTGTTTGTAATTGTAAGAGATTTTTTTGACATGGTGGATGAGGTTTGCAGTGATCTCAGAAGGAAGATAGAGAAGAAGAATATAGGAGGAGAAGGTGCATCAACAACACCACCTCTTTCACCCTCAAAGAAAGCACCACTCAGGTTCCCAAAATTTGATTTGAACTTTCTGTCAAACATGTCAAGTGCAACATCATGTTCTAGCCTATCAGATGATGATTTCTGA 2094 0.4045 MAVAATAIAVLLIVAVIFFYFKKFACSWRYRHRHRVAASFRREAGFNNEDIRKVDKNVKGLLADEENGIDILYMVETQGRHFKTSFPTRIFNPSYEHNQEEEKRIDVMVQRSLHYETQEVPLLCESPGSALMVHKDLVKQVQPPSPSPPPPPPPPPPPPSPPRNKIPKASSPVPSAPIMNRESGASAQKSSGFISSSKPPPPPKRKSNMENNTGSRDKGASQTRLRPLHWDKVVANVDHSTVWDHINDGSFRFDDELIETLFGYSTNNQANERNICHASSAQIFLVDRRKSQNTSIVLRSLEISRKEIMDAVLDGQGLSLETLEKLTKIAPAQEEEDKIIQFSGNPDKLAYAESFLYCILKSVPTAFIRLKAMLFRSNYDCEIVQLKENLQTLEKGCKEMRSSGLLLKFLEAILKAGNRMNAGTSRGNAQGFNLSALRKLPDVKSIDGKTSLLHFIVEQVAQSEGRREAMNQKRNIPKINCDISNSNATHSDSDNNNNNLVQHETEKEYLILGLEVLLGGIKDQLSEVKKAATIDHQNFISMFCTLNAHVGEIREIITKCCGDNKGGGFAMEMKGFVEECEEELKVVKEEHLRIMELVKKTNEYYLGGGGGSSDNNNMSNPFELFVIVRDFFDMVDEVCSDLRRKIEKKNIGGEGASTTPPLSPSKKAPLRFPKFDLNFLSNMSSATSCSSLSDDDF 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211697g00011 697 Coils Coil 376 403 - -
Stsc211697g00011 697 Pfam Formin Homology 2 Domain 219 635 IPR015425 -
Stsc211697g00011 697 MobiDBLite consensus disorder prediction 142 168 - -
Stsc211697g00011 697 Gene3D Formin, FH2 domain 237 653 IPR042201 -
Stsc211697g00011 697 MobiDBLite consensus disorder prediction 139 227 - -
Stsc211697g00011 697 ProSiteProfiles Formin homology-2 (FH2) domain profile. 215 661 IPR015425 -
Stsc211697g00011 697 SUPERFAMILY Formin homology 2 domain (FH2 domain) 149 649 - -
Stsc211697g00011 697 PANTHER FORMIN-RELATED 4 678 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc211697g00011 697 MobiDBLite consensus disorder prediction 181 195 - -
Stsc211697g00011 697 SMART it6_source 215 650 IPR015425 -
Stsc211697g00011 697 Coils Coil 577 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211697g00011 Stsc-Chr211697 56044 58293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211697g00011 2 694 FH2 protein (formin) Gene Family AT1G70140 39.373 9.12e-146 441