Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211697g00009 ATGGCTGCTGCTGGTGAAGTTTTGAGGCAGAATTTGCCTGAGAAGCTTGAGGAATCTCCTTCTGGTGCTGCAAATGAGCTTCATGTTTTAGCTGTTGATGACAGTCTTGTGGATAGAAAGGTCATTGAACGCTTGCTCAAGATATCTTCTTGCAAAGTGACAGTTGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGGTTGGATGGGGACAAGAAAACCTCTATTGGATTTGATAGTGAGAAGGTTAATTTGATAATGACTGATTATTCAATGCCGGGGATGACTGGTTATGATCTCCTCAAGAAAATCAAGGAATCGTCCGTTTTTAGAGAGATTCCGGTGGTGATCATGTCATCAGAGAATATCTTGACAAGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGACTTTCTATTAAAGCCGGTGAAGTTATCCGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGTGAAGTGAAGGAAGGAGAGAAAAGATGCTGCAAAAGATCACGATCCGAGGATTGGAGCCCGTCGTCAACGACTCATCCCTGCGATACATCGCCGCTGTCGTCGTCTTCACTACTTTCGCAATTGTCAACATCTACCTTGTCCTCCAAGAAATCTAGATTATGA 636 0.4308 MAAAGEVLRQNLPEKLEESPSGAANELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKKTSIGFDSEKVNLIMTDYSMPGMTGYDLLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMKGEVKEGEKRCCKRSRSEDWSPSSTTHPCDTSPLSSSSLLSQLSTSTLSSKKSRL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211697g00009 211 MobiDBLite consensus disorder prediction 167 211 - -
Stsc211697g00009 211 MobiDBLite consensus disorder prediction 174 211 - -
Stsc211697g00009 211 Pfam Response regulator receiver domain 29 149 IPR001789 GO:0000160
Stsc211697g00009 211 SUPERFAMILY CheY-like 25 151 IPR011006 -
Stsc211697g00009 211 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 177 IPR045279 GO:0009736
Stsc211697g00009 211 SMART REC_2 27 152 IPR001789 GO:0000160
Stsc211697g00009 211 Gene3D - 27 186 - -
Stsc211697g00009 211 CDD REC_typeA_ARR 29 151 - -
Stsc211697g00009 211 ProSiteProfiles Response regulatory domain profile. 28 156 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211697g00009 Stsc-Chr211697 47124 48884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211697g00009 5 170 Response Regulator Gene Family AT3G48100 70.060 7.07e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc211697g00009 Response_reg 4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211697g00009 K14492 - gmx:100796843 282.722