Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211697g00006 | ATGCCTTCCTCTTCTTCCACTTCCAGACAACCAATTCCCCAGTCTCGCAAGCAAAAGTCCCTCGGTCTCTTATGCACCAATTTCCTCTGCTTGTATAATAAACACGACGTCCAAGTCATCGGCCTCGACGCCGCCGCCGCCCGATTAGGTGTTGAGAGAAGACGGATCTACGATATAGTCAATATTCTCGAGAGCATCGGGGTGCTTGCAAGAAAGGCCAAAAATCAATATACATGGAAAGGCTTTGGCGCAATTCCCGGTGCTTTACATGAACTCAAGGAGGAGGGATTAAGGGAGAATGCATATGGTTTTGAGGGCGGCAATGACCTAAAAGTGTCTGATGACGAGGATGATGAAGAAACATTTTCCAATCCAGGGACCGGGAGTCAAAATGACAAGTCCAATTCCAATTCAAATTCAAATTCTGCAACACTTGCCAAATCTCTCAAAAACGATAATCGAAGGGAAAAATCATTGGCGCTGCTTACTCAGAATTTTGTAAAGCTATTTGTTTGCTCTAATATAGAAATGATCTCCCTTGATGAGGCTGCGAATTTGTTGCTTGGAGATGGCCACAGTACATCATTAATGAGAACAAAAGTAAGACGCCTATATGATATTGCAAATGTGTTGTCCTCCATGAACCTTATCGAGAAGACTCATACCACAGATACAAGAAAACCAGCATTCAGGTGGCTGGGTTTGAGAGGGAAGGCACCAAATGAGTCCATTCACAAAAGTTCAAATACAAACGAGTCTAGGAAAAGAGCGTTTGGGAGTGATGTCACAAACATTAGTTTTGAGAGGAACATAGTGGAATTAGGGGACTTCGCCTCTAAGAAGCTCAAAAAACTGGACAATGATAATGGCATAGGTCAAGCAAATAGTTTTCAACAAACTTCAAAGGGTTTTCAGTTTGGTCCTTTCGCACCCTATGTGCCCAAAGTTGGAACACCAGAGAATAATAGTGTAAAGAAGGTTCATGATTGGGACAGTCTAGCACTTAAACATCGTCCACAATACCAAAACCAAGCTTTGAAAGAACTATTCTCCCATTATATGGAAGCATGGAAATCGTGGTACTCAGAAGTTGCCGGTAAGAATCCAATGCAGATTTAG | 1119 | 0.4254 | MPSSSSTSRQPIPQSRKQKSLGLLCTNFLCLYNKHDVQVIGLDAAAARLGVERRRIYDIVNILESIGVLARKAKNQYTWKGFGAIPGALHELKEEGLRENAYGFEGGNDLKVSDDEDDEETFSNPGTGSQNDKSNSNSNSNSATLAKSLKNDNRREKSLALLTQNFVKLFVCSNIEMISLDEAANLLLGDGHSTSLMRTKVRRLYDIANVLSSMNLIEKTHTTDTRKPAFRWLGLRGKAPNESIHKSSNTNESRKRAFGSDVTNISFERNIVELGDFASKKLKKLDNDNGIGQANSFQQTSKGFQFGPFAPYVPKVGTPENNSVKKVHDWDSLALKHRPQYQNQALKELFSHYMEAWKSWYSEVAGKNPMQI | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211697g00006 | 372 | FunFam | E2F transcription factor-like E2FE | 149 | 236 | - | - | |
Stsc211697g00006 | 372 | SUPERFAMILY | "Winged helix" DNA-binding domain | 15 | 79 | IPR036390 | - | |
Stsc211697g00006 | 372 | SMART | E2F_TDP_2 | 154 | 234 | IPR003316 | GO:0005667|GO:0006355 | |
Stsc211697g00006 | 372 | SMART | E2F_TDP_2 | 16 | 81 | IPR003316 | GO:0005667|GO:0006355 | |
Stsc211697g00006 | 372 | Pfam | E2F/DP family winged-helix DNA-binding domain | 156 | 234 | IPR003316 | GO:0005667|GO:0006355 | |
Stsc211697g00006 | 372 | Pfam | E2F/DP family winged-helix DNA-binding domain | 17 | 81 | IPR003316 | GO:0005667|GO:0006355 | |
Stsc211697g00006 | 372 | Gene3D | - | 149 | 236 | IPR036388 | - | |
Stsc211697g00006 | 372 | Gene3D | - | 11 | 84 | IPR036388 | - | |
Stsc211697g00006 | 372 | PANTHER | TRANSCRIPTION FACTOR E2F | 11 | 342 | IPR015633 | GO:0000978|GO:0006357 | |
Stsc211697g00006 | 372 | FunFam | E2F transcription factor 8 | 12 | 83 | - | - | |
Stsc211697g00006 | 372 | MobiDBLite | consensus disorder prediction | 108 | 144 | - | - | |
Stsc211697g00006 | 372 | MobiDBLite | consensus disorder prediction | 123 | 144 | - | - | |
Stsc211697g00006 | 372 | SUPERFAMILY | "Winged helix" DNA-binding domain | 156 | 235 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211697g00006 | Stsc-Chr211697 | 32966 | 35787 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211697g00006 | 15 | 370 | E2F-DP Transcription Factor Family | AT3G48160 | 54.595 | 4.04e-128 | 372 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | E2F-DP | Stsc211697g00006 | E2F_TDP | 1.8e-20 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211697g00006 | K09391 | - | gmx:100806151 | 493.426 |