Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211696g00004 ATGAAGGGCACAAGAATGGCAACATGGTTAAGTGTTCTGGTTTTTGCTGTTATATTGCTTAAGGCAGAAGGAGTTGATGTAGGACTCACTTATGTTCAAAGTGCTGTACCAAAAGGAGCTGTTTGCTTGGATGGAAGTCCACCAGCTTACCACTTTGATAAGGGCTTTGGAGCAGGAATTAACAACTGGATTGTTCACTTCGAGGGAGGAGGTTGGTGCAACAATGTCTCTGTTTGTCTCGACCGCAGGGACACTCGCTTAGGTTCATCTAAAAATATGGATCAGACAGCTTCCTTTTCTGGATATCTAAGCAACAAGCAAAAATTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGATACTGTGATGGTTCATCATTTACCGGTGACGTTGAAGCAGTTGATCCTAAAACCAATTTGCACTTCAGAGGAGGAAGAATTTTTGTTGCTGTGATTGAGGACTTGCTAGCAAAAGGAATGAGAAATGCTCAAAATGCTATTCTTTCAGGATGTTCAGCAGGAGGGTTGACAGCAATACTACAATGCGATCGCTTTAGATCTCTAATTCCAGCAGGAGCTAAAGCCAAATGCATTTCAGATGCTGGTTATTTCATCAATGTAAAGGATGTCTCTGGAGCACAACACATTCAAGAGTTCTACAGTCAAGTTGTTGCAACACATGGGTCGGCCAAGAATTTGCCTGCCTCATGCACTTCAAGACTGAGCCCAGGGCTGTGTTTTTTCCCAGAGAATGTGGTATCACAGATCAAAACACCAATTTTCTTTGTGAATGCAGCATATGACTCATGGCAGATAAAGAACATATTGGCACCGGGTGTTGCTGATCCGCACGGGCAATGGAGAGAATGCAAGCTAGACATAAAGAAATGCTCGTCTGGACAACTGAGCGTAATGCAAGGGTTCAGGACAGACTTCTTGAGTGCACTGAGTGGAGTAGGGAACTCTCCAGCAAGAGGGAAGTTCATAGATGGATGCTATGCTCACTGCCAGATGGGAACACAGGAGACATGGATGAGAGCAGACTCACCCGTGTTGGCCAAAACAACAATAGCAAAGGCAGTGGGAGATTGGTATTACGAAACAAGGCCATTCCATGAGATTGATTGCACTTACCCTTGCAATCCTACTTGCCATAACCGTATCTTTGATAACAACCAAAAAGATGATTAA 1197 0.4344 MKGTRMATWLSVLVFAVILLKAEGVDVGLTYVQSAVPKGAVCLDGSPPAYHFDKGFGAGINNWIVHFEGGGWCNNVSVCLDRRDTRLGSSKNMDQTASFSGYLSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGGRIFVAVIEDLLAKGMRNAQNAILSGCSAGGLTAILQCDRFRSLIPAGAKAKCISDAGYFINVKDVSGAQHIQEFYSQVVATHGSAKNLPASCTSRLSPGLCFFPENVVSQIKTPIFFVNAAYDSWQIKNILAPGVADPHGQWRECKLDIKKCSSGQLSVMQGFRTDFLSALSGVGNSPARGKFIDGCYAHCQMGTQETWMRADSPVLAKTTIAKAVGDWYYETRPFHEIDCTYPCNPTCHNRIFDNNQKDD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211696g00004 398 Pfam Pectinacetylesterase 21 370 IPR004963 GO:0016787
Stsc211696g00004 398 PANTHER NOTUM-RELATED 13 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211696g00004 Stsc-Chr211696 23555 26328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211696g00004 5 391 Carbohydrate Esterase AT4G19420 57.346 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211696g00004 K19882 - gmx:100781246 682.559