Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211696g00002 ATGTTGGGGCATTCTCGGAAGTGGATAATTGTGGTGGTCACAATATGGGTGCAGGCCTTCACTGGAACCAACTTCGATTTCTCTCAGTACTCCTCCGCCATGAAATCCGCCCTCAACATATCACAGATGCACCTCAACTACCTCGCCACCGCTAACGACATGGGCAAGCTCTTTGGCTGGTCCTCTGCCTTCGCCCTCATCTACTTCCCGCTGCCCGCCATCATGTTCATGGCGGCCGCCATGGGCTTTGTCGGCTATGGCCTCCAGTGGCTCCTTCTCCAAGGCTTCATCAACCTCCCTTATTTTCTGGTGTTTGTTCTGAGTCTATTAGGAGGGTGCAGCATATGTTGGTTCAACACAGTATGCTTTGTGCTCTGCATAACAACTTTCCCGCTCAACAGATCACTAGCACTCTCCCTCACTGTCAGCTTCAATGGCGTCAGCGGGGCACTCTACACCCTCGCTGCCAATTCAATAGACCCTTCATCTCCTTCTCTCTATCTACTTCTCAAAGCCCTTCTTCCCCTTCTCGTCTCCTTCGCCGCCCTAGCCCCAATTCTGCCCCACTCTCCTCCTCATCATGGCCATGACTCATCACAACACTCCAATAATAACGCCGACTCCATCATGTTCCTAATACTCAACCTGCTCGCCACTCTCACCGGCCTCTACCTCCTCCTCTTTGCCTCCCATGCCTCCACCGATGCCCCATCCGCCAGGCTCTACTTGGGGGGAGCCATTTTACTTCTTGTGTTGCCCTTGTTCATTCCCGGAGTTGCTTATGCTAGGTCCTGGTTTCATCAAGCTGTGTATTCCACCTCCAGTAGCTTCATTCTTGTCCATGATGACGATCTGGAGCTGCATAAAGAACTGATCATTAGCCGCAACGACGATGACGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGGAGGAGCGTGTTGCAAAAGGATGCTTAGCCAGGATGCACTGGTAATGCTAGGAGAAGAGCACAGTGGGGGAGCGGTTCTTGGGAGGGTGGATTTTTGGCTCTACTATGTGACATACTTTTGCGGAGGAACTATTGGGCTTGTATATAGCAATAACCTGGGACAGATTGCACAGTCTTTGGGGATGACTCATAACATTTCTACACTTGTGATGCTCTACGCCTCCTTTTCCTTCTTCGGTCGCTTGCTTTCTGCTCTACCCGATTATATTCGCAGCAAATTGTACTTTGCAAGGACTGGATGGCTATGCATTGCACTAATACCCACCCCGATTGCATTCACATTGATGGCCCTATCACAAACTCCCCTGGCACTCCCCATAGCCACAGCCTTAATAGGCTTCAGTTCCGGTTTCATATTCGCTGCTGCCGTCTCCGTTACGTCCGAGCTCTTTGGTCCCAACAGTGTTGCCGTCAATCACAACATTCTCATAACAAACATCCCAATTGGATCCCTCATCTACGGCTTCCTCTCCGCCTTACTCTACGACGCCAACACTGACTCTAACTCCTCCGTCTGCATCGGCACCCACTGCTACTTCTCCACTTTTGTGTTCTGGGCTTCCACAGCTCTCCTCGGACTACTTTCTAGTCTCCTCTTGTTCTTCAGAACCAAACATGCATACCAGCATTTCGAGTACCACCGTATTTCAACACAAGCTATTTTATCTTAA 1659 0.5069 MLGHSRKWIIVVVTIWVQAFTGTNFDFSQYSSAMKSALNISQMHLNYLATANDMGKLFGWSSAFALIYFPLPAIMFMAAAMGFVGYGLQWLLLQGFINLPYFLVFVLSLLGGCSICWFNTVCFVLCITTFPLNRSLALSLTVSFNGVSGALYTLAANSIDPSSPSLYLLLKALLPLLVSFAALAPILPHSPPHHGHDSSQHSNNNADSIMFLILNLLATLTGLYLLLFASHASTDAPSARLYLGGAILLLVLPLFIPGVAYARSWFHQAVYSTSSSFILVHDDDLELHKELIISRNDDDEEKEEEEEEEGGACCKRMLSQDALVMLGEEHSGGAVLGRVDFWLYYVTYFCGGTIGLVYSNNLGQIAQSLGMTHNISTLVMLYASFSFFGRLLSALPDYIRSKLYFARTGWLCIALIPTPIAFTLMALSQTPLALPIATALIGFSSGFIFAAAVSVTSELFGPNSVAVNHNILITNIPIGSLIYGFLSALLYDANTDSNSSVCIGTHCYFSTFVFWASTALLGLLSSLLLFFRTKHAYQHFEYHRISTQAILS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211696g00002 552 Gene3D MFS general substrate transporter like domains 338 542 IPR036259 -
Stsc211696g00002 552 Pfam Nodulin-like 7 257 IPR010658 -
Stsc211696g00002 552 SUPERFAMILY MFS general substrate transporter 6 535 IPR036259 -
Stsc211696g00002 552 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211696g00002 Stsc-Chr211696 6236 9411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211696g00002 1 546 Nodulin-like Gene Family AT1G31470 55.179 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211696g00002 - - adu:107477779 740.339