Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211695g00006 ATGGAACCCTATAAAGGACAAGGCGGCATTCAGATGCTGCTATCTGCTGAACAAGAAGCACAACTTATTGTTTCCAATGCAAGAAGCTTGAGGAGTAAGAGATTGAAGCAGGCACAAGAAGAAGCTGAGAGGGAGGCAGCACAATACAGATCTCAAATGGAAGAAGAATACCAAAAGTCAATCTCAGAGACCACTGGAAGCTCTGGATCCAATGTAAGAAAGCTTGAGGAAGAGACAGATGCCAGTATAAGAAATATTAAGAGATCAGCTTCAAAGGTCTCTTCAGAAGTTGTTGATATGATGCTCAAATATATATATTTCAAATGTTAA 330 0.397 MEPYKGQGGIQMLLSAEQEAQLIVSNARSLRSKRLKQAQEEAEREAAQYRSQMEEEYQKSISETTGSSGSNVRKLEEETDASIRNIKRSASKVSSEVVDMMLKYIYFKC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211695g00006 109 FunFam V-type proton ATPase subunit G 3 107 - -
Stsc211695g00006 109 Coils Coil 32 59 - -
Stsc211695g00006 109 Pfam Vacuolar (H+)-ATPase G subunit 7 106 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc211695g00006 109 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 105 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc211695g00006 109 MobiDBLite consensus disorder prediction 53 72 - -
Stsc211695g00006 109 Gene3D - 2 108 - -
Stsc211695g00006 109 MobiDBLite consensus disorder prediction 35 52 - -
Stsc211695g00006 109 MobiDBLite consensus disorder prediction 35 79 - -
Stsc211695g00006 109 NCBIfam V-type ATPase subunit G 8 106 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211695g00006 Stsc-Chr211695 51533 52660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211695g00006 8 105 Primary Pumps ATPases(2) AT4G23710 50.000 5.77e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211695g00006 K02152 - gmx:100818549 156.762