Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211686g00012 ATGGAGCAACAAGATAACAGAGAACTTGACCTTCTACCGTCTTCGCGGGCCGATTCCTCTTTGCTTCGCTTCCGATCCACGGTTTCTTCGTCTTCGCTGCCCGACGGAGCGCCTTCTGTCGACCTTCAGCTTTCCATAAGCGTCGGCCGTCCGGCGGCGGCGGCGGAGTGCGTGGTTCGGATGTGCGAGGGCGTGGAGGCGCTGAAGTGGGAGGCGGCGGAGCAAATCAGGCTGGCGGCGATGGAGAAGGCGTACGCGGAGCGTGTGAGGGAGCTCACGCGCCGCGAGATGGAGATGGCGCAGTCGGAGTTCGCTCGCGCCAGGCAAATGTGGGAGCGTGCTCGGGAGGAGGTGGAGAGTGCCGAGCGGTTGAAGGAACGCGCCACCACCGGCCGCCGCCTCGACTCCTCTAATTCCTCCAGCTCCTCGTCGTCTCCGTTGGAGATCACGTGCCACTCGTGCCGGCAGAGGTTCAGGCCGGCCTGA 486 0.644 MEQQDNRELDLLPSSRADSSLLRFRSTVSSSSLPDGAPSVDLQLSISVGRPAAAAECVVRMCEGVEALKWEAAEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVESAERLKERATTGRRLDSSNSSSSSSSPLEITCHSCRQRFRPA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211686g00012 161 MobiDBLite consensus disorder prediction 116 149 - -
Stsc211686g00012 161 Coils Coil 90 124 - -
Stsc211686g00012 161 PANTHER OS03G0310200 PROTEIN 20 160 - -
Stsc211686g00012 161 MobiDBLite consensus disorder prediction 116 132 - -
Stsc211686g00012 161 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211686g00012 Stsc-Chr211686 60734 61503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211686g00012 72 159 C2H2 Transcription Factor Family AT2G01940 34.831 4.89e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211686g00012 - - var:108340281 202.986