Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211686g00002 ATGAGGATTTTCATTGTGCTAGATGATGTCACTAATTCACAAATTGCAACCGAGTTGATTCAACTGCTTCGTAATTGCCTGAGTCCCGGTAGTAGAATCATTTTGACAACAAGAGATAGAAATGTGCTTACAAGTGGAGGAGTTGAAGAAATCTATGAAGTGAAGGAAATGAATTTTGAGGACTCCCTTAAATTCTTTAGTCATAATGCCTTTAATGATTCTCATCCTAAAGAGGGTTATTATGAGCTATCAGCAAGAGTTGTAGCAGAGTATGCCAAAGGGATACCATTGGCATTGAAAATCTTGGGATCATTTCTTCGGAGTAAAGGAGAAAGGGAATGGGATAGTGCACTGAGAAAACTGCAAAAGTATCCCAATGCAGATATTCAGCAAGTGTTGAGAATGAGTTATGATGCATTGGATGATGATGAAAGAAACATCCTTTTAGATGTTGCGTGTTTTTTCCATGAATATAAAGTGGAAAGAGTAATGAGAATATTGAATTCTTGTGGTTTCTTTGCAATGAAATGTGTTGGCAAATCATTCATGAAGAATCTAGCAAACATTGTCAACAACAAACAAGATTGTGGGATACTGAAGAAGTCTGATATTCATGAAGTTGAAAGCATGATTGTGGATATGAACCAAATTACAATAGATCCATGTATAATCATCATGGCACTAAGGAAGATGCCAAAGTTAAGATTACTCGCTTTAAAAGGAAATATCAGCATGGATCTTGAATGGAAACTTCCCAAGGATTTTCAACTTCCTAATAACTTAAGGTATATTGAATGGAATAAATGCCCACTTAAGTTTGTGTCGTCCATTTGTTGGCCTCAAACACTTGTTGAGCTTTCCATGCAAAATGGTAATGTTCAGAAAACTTTGGGATACATTACAGTTACCCTCTCTCAAAACTTTGCCCACACAATTGCCCTCATGGATCCAATAAAACATGATGATGAAGTTGACACATGCATCATCTTAAGCAGAATATTTCCTACCCCTGCTTTCTTGTGTGTCAAGGAACTATATTTCTTCAGATGTAAGAGCTTGTCTGAACTACCAGACAACATTCATGTCTTACAGTCATTACAATTATTAGCAATTCATTGTTGTGGTGTCATTGTAAGTTTGCCAGAAAGCATCAAGAATCTTCAACAGCTCATGCAACTTTTCATCACTGACTCTGAAATGCTTCAACCATTTCCCCCCTCTATTGTATACTATTGTGTAGTAAACTGTAAATCTTTGGAGACAATCTCAAGTTTAACCAGTGAATTACCACCCAGAAAACAGAATGCTACCTGGAAAAGGGTTATTGCAGCAATGAATGGGAATGGTTAG 1350 0.3667 MRIFIVLDDVTNSQIATELIQLLRNCLSPGSRIILTTRDRNVLTSGGVEEIYEVKEMNFEDSLKFFSHNAFNDSHPKEGYYELSARVVAEYAKGIPLALKILGSFLRSKGEREWDSALRKLQKYPNADIQQVLRMSYDALDDDERNILLDVACFFHEYKVERVMRILNSCGFFAMKCVGKSFMKNLANIVNNKQDCGILKKSDIHEVESMIVDMNQITIDPCIIIMALRKMPKLRLLALKGNISMDLEWKLPKDFQLPNNLRYIEWNKCPLKFVSSICWPQTLVELSMQNGNVQKTLGYITVTLSQNFAHTIALMDPIKHDDEVDTCIILSRIFPTPAFLCVKELYFFRCKSLSELPDNIHVLQSLQLLAIHCCGVIVSLPESIKNLQQLMQLFITDSEMLQPFPPSIVYYCVVNCKSLETISSLTSELPPRKQNATWKRVIAAMNGNG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211686g00002 449 Gene3D - 1 51 IPR027417 -
Stsc211686g00002 449 Gene3D - 57 141 IPR042197 -
Stsc211686g00002 449 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 423 IPR044974 GO:0006952
Stsc211686g00002 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 150 IPR027417 -
Stsc211686g00002 449 SUPERFAMILY RNI-like 206 422 - -
Stsc211686g00002 449 Pfam NB-ARC domain 2 140 IPR002182 GO:0043531
Stsc211686g00002 449 Gene3D Ribonuclease Inhibitor 183 441 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211686g00002 Stsc-Chr211686 4986 8089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211686g00002 2 394 WRKY Transcription Factor Family AT5G45050 27.215 2.30e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211686g00002 - - ahf:112708781 440.654