Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211683g00004 ATGCAAACTCTTGTCATCATCTTGCCAATCTTTTCCGTTTTATTTGTGCTAATAAAATGGTATTCCACAAGCAGAAAAAGGTCACTCCCTTCTCCGCTGAAATTCCCAATAATAGGAAATCTCCACCAACTAGGTTTGTACCCTCATCGCACCCTCCATTCTCTGGCCAAAAGATATGGCCCCTTGATGCTGCTCCATCTTGGGAGGGTGCCGGTTCTGGTGGTCTCTTCCGCTGAAGGTGCACGTGAGATCATGAAAACCCATGATCTTGTATTTGCAAGCAGACCCCAAAGGAAATTGTTCGACATACTTGTATACGGTTCCAAAGATGTGTCAACGGCCCCATATGGTGAGTACTGGAGGCAACTAAGGAGCATTTGTGTGTTGCATCTTCTCAGTGTGAAAAGGGTTCAATCATTTAGCGCTGTGAGAGAGGAGGAAACTCAAATCATGATGGAAGAAATCAAGCATTGTTCTTCATCCTCTGTTCCAATTAACTTGAGCCAATTATTCTCTAAGATCACCACTGACATACTTTGCAGGGTCACTTTCGGAAGAAAATATGGTGGAGAAAGTAGGAGAGAGTTTAAGGAGTTGTTCATGGAGTTTACTGAACTTCTTGGCAGCTTTGTTATTGGAGAGTTGGTGCCTTGGCTTGATTGGTTGACCAGTGTTTCTGGGTTGTATACTAGAGCCAACAGAGTAGCTACAAGGTTTGATAAATTCTTGGAGGAAGTAGTTGATCACCATGCCAATGGATATCAAGATGATGACGTTACACGCAATGTGGATCATGTTGGATCATCAGCATCAGCATCAGATGCTCAAGGTCACAATGATTTTGTTGATGTTTTGCTTTCTCTCCAAAATACAAATGCAACTGGATTTCCAATTGATAGAACAGCGATCAAGTGTTTAATGTTGGATGTGTTTGTTGCAGGTACAGACACTACATCTACCATCTTAGAGTGGACAATGACAGAGATCTTAAGACACCCAATGGTGATGAAGAAAGTGCAAGACGAAGCGAAAAACGTGGTTGGTAACAGAGCAATGATAACCGAAGATGATCTGGTTCACATGCACTACTTAAAAGCCGTGGTTAAAGAAGCTCTTCGACTACACCCACCAATTCCGCTACTAGTCCGGCGAGAAAGCACACAAGATATCAAACTGCAAGATTATAACGTTGCTTCCGGAACACAAGTGATTGTGAATACATGGGCAATAGCAAGGGATCCTAAGTATTGGGACCAACCTGAAGAGTTCATGCCGGAGAGGTTCATGAATAGTTATATGGATGTGAAAGGGAATGATTTCGAATTGATTCCGTTCGGAGCAGGGAGAAGGGGCTGCCCAGGAACAATATTTGCCATGGTTATCATTGAGATTGTGCTAGCCAACCTCCTCCACCAATTTGAATGGGCATTACCAGAGGGTGTGGAGAATTTGGACATGTCTGAAACGTTTGGATTAACCATTTATAGAAAGGTTCCTCTTAGAGCCCTTGCAAGCCCAAAGAAATAA 1527 0.4296 MQTLVIILPIFSVLFVLIKWYSTSRKRSLPSPLKFPIIGNLHQLGLYPHRTLHSLAKRYGPLMLLHLGRVPVLVVSSAEGAREIMKTHDLVFASRPQRKLFDILVYGSKDVSTAPYGEYWRQLRSICVLHLLSVKRVQSFSAVREEETQIMMEEIKHCSSSSVPINLSQLFSKITTDILCRVTFGRKYGGESRREFKELFMEFTELLGSFVIGELVPWLDWLTSVSGLYTRANRVATRFDKFLEEVVDHHANGYQDDDVTRNVDHVGSSASASDAQGHNDFVDVLLSLQNTNATGFPIDRTAIKCLMLDVFVAGTDTTSTILEWTMTEILRHPMVMKKVQDEAKNVVGNRAMITEDDLVHMHYLKAVVKEALRLHPPIPLLVRRESTQDIKLQDYNVASGTQVIVNTWAIARDPKYWDQPEEFMPERFMNSYMDVKGNDFELIPFGAGRRGCPGTIFAMVIIEIVLANLLHQFEWALPEGVENLDMSETFGLTIYRKVPLRALASPKK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211683g00004 508 CDD CYP71-like 58 500 - -
Stsc211683g00004 508 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc211683g00004 508 PANTHER CYTOCHROME P450 71B11-RELATED 18 504 - -
Stsc211683g00004 508 SUPERFAMILY Cytochrome P450 30 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 Gene3D Cytochrome P450 16 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00004 508 FunFam Cytochrome P450 83B1 16 503 - -
Stsc211683g00004 508 Pfam Cytochrome P450 30 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211683g00004 Stsc-Chr211683 21981 24195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211683g00004 25 505 Cytochrome P450 AT3G48270 50.826 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211683g00004 - - gmx:100806940 621.698