Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211683g00002 ATGATTCTCTCTTACGCACTCTTTGTTTTCCTTACACTCCTCTTCCTCATCTTAACATTTACAAAATCAGATCTAAAAAGAAATAATCTTCCTCCGGGCCCATGGAGATTGCCATTCATCGGCAACCTTCACCAAGTTGGGGAGCTCCCCCATCGATCCCTTCAACAATTGTCAAGTATTCATGGACCACTCATGTTCTTGAAGCTGGGTTCTGTCCCTACTTTGGTGGTCTCCTCCGCCGAGATAGCCAAAGAGATCTTCAAGAACCATGACTTGGCTTTCTCCGGCCGCCCCAAGCTGTATGCCGCGAACCGTTTGGGATATAACGGTTCATCTATTGCTTTCACTCCTTATGGTGAATACTGGAAGGAGATAAGGAAAATTATGATGTTGGAGGTGCTGAGTGCCAAGAGGGTTCAATCTTTTCAAGCTGTGAGGCTTGAAGAGGTTCAAAATCTTCTACATTCCATAGCTCTTTCTGGTGGTACTCCTGTTAACCTTAGCCAGTTGACGCTTTCTCTTACCAATAATGTTGTTTGTCGGATTGCTTTTGGCACAAGATTTGGGGGTCCAAGTAGTAAGTTCTATGAGCATGCTACTGTTAATAATAATGATCATTCTAAGAGGCAGCATGATGAAGATCTTGTTCATGTTCTTCTTCGACTCCAAAAGGATTCAAATCAAACAATAGCCCTCAACGATCAACACATCAAGGGTGTCCTAACAGACATTTTCATAGCAGGGACAGATACGGCATCTGCCACAATGATATGGACAATGTTGGAGCTAATAAAGAACCCAGACAAAATGGAAAGGGCAACACGAGAGGTAAGAGAATTAGTACTCTTGAAGAAGGAGAAAAATGTTATGGTGGAAGAAAGTGACCTTTCAATGCTTCCATACCTCAAATCAGTAGTTAAGGAAGCACTAAGAATCCATCCTCCAGCACCACTCCTCGTCCCAAGAGAGACCATCCAACCTTGCACCATCAAAGGCTATGGAATCCCCGCGGGAACGAGGGTCTTCATCAACGCCAAAGCCATAGCAATGGATCCAGCTTGTTGGGAGAATCCAAACGAGTTCACTCCGGAGCGGTTCCTACATAATCCAATTGATTACTTCAAAGGGCAACATATTGAGATGTTGCCCTTTGGAGCTGGACGGAGGGGCTGCCCCGGAGTGAACTTTGCCATGCCATTGGTTGAGCTTTCTCTGGCAAATCTTTTGCTTCGTTTTGATTGGAAACTGCCAAATGGAATCGGAAGGAATGAAGTTGACATACAAGAAGCAATTGGCCTTACAATGCACAAGAAATCTCCTCTTTGCCTCATACCCTTCCCCATCTATCTGTAA 1353 0.4442 MILSYALFVFLTLLFLILTFTKSDLKRNNLPPGPWRLPFIGNLHQVGELPHRSLQQLSSIHGPLMFLKLGSVPTLVVSSAEIAKEIFKNHDLAFSGRPKLYAANRLGYNGSSIAFTPYGEYWKEIRKIMMLEVLSAKRVQSFQAVRLEEVQNLLHSIALSGGTPVNLSQLTLSLTNNVVCRIAFGTRFGGPSSKFYEHATVNNNDHSKRQHDEDLVHVLLRLQKDSNQTIALNDQHIKGVLTDIFIAGTDTASATMIWTMLELIKNPDKMERATREVRELVLLKKEKNVMVEESDLSMLPYLKSVVKEALRIHPPAPLLVPRETIQPCTIKGYGIPAGTRVFINAKAIAMDPACWENPNEFTPERFLHNPIDYFKGQHIEMLPFGAGRRGCPGVNFAMPLVELSLANLLLRFDWKLPNGIGRNEVDIQEAIGLTMHKKSPLCLIPFPIYL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211683g00002 450 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 Pfam Cytochrome P450 197 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 Pfam Cytochrome P450 31 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 CDD CYP71-like 61 441 - -
Stsc211683g00002 450 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS E-class P450 group I signature 344 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 FunFam Predicted protein 245 443 - -
Stsc211683g00002 450 Gene3D Cytochrome P450 16 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 Gene3D Cytochrome P450 201 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00002 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Stsc211683g00002 450 PANTHER CYTOCHROME P450 71B11-RELATED 205 446 - -
Stsc211683g00002 450 SUPERFAMILY Cytochrome P450 31 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211683g00002 Stsc-Chr211683 6348 8513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211683g00002 5 445 Cytochrome P450 AT3G26300 40.882 8.19e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211683g00002 K20617 - gmx:100806157 545.814