Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211683g00001 ATGGAGTTTACAGAGCTTCTTGGTACTTTTGTTATAGGGGACTTTGTTCCTTGGCTTGATTGGTTAACTCGTGTGTCTGGAGTGTATTCTAGAGCATATAAAGTGGCTTCACAATTTGATAATTTCTTGGACCAAGTACTTGATGAGCATATCAATAGACAGAAAGAAACCAGGAGTATTGAGAATGTTAGTTCAGACACTAAAAGCCATACTGATTATGATTTTGCAGATGTGTTGCTTACATTACAAGGCACAGACAGAACTGTAATGAAGGCTTTGTTATTGGATGTGTTTGCTGGTGGTACGGACACTGTATCAACAATGGTAGAGTGGGCAATGACAGAACTCATAAGGCATCCAACTGTGATGAAGAAAGTTCAAGATGAAATGAGAAACGTGGTTGGTGAAGCAAAATACATAACTGAAGAGAATTTGGCTCACATGAAATACTTAAAAGCTATGATTAAAGAAAATCTGCGGCTACATCCCCCAATTCCATTACTAGTCCCACGAGAAAGCATGCAAGATGTGAAATTAGAGGGTTACAACATTGCGTGTGGAACAAGAATAATTGTGAATGCATGGGCAATTGCAAGAGATCCCGCGTATTGGGACCAACCTGAAGAGTTCAAACCTGAGAGGTTCTTGAATAGTTCAATTGATGTGAAGGGGAATGATTTCCAATTGATTCCATTTGGTGCAGGGAGGAGAGGATGCCCTGGAATAGTGTTTGCTATAGCTGTCAATGAACTTGTGCTGGCCAACCTCCTTCACCAATTTGATTGGAAAACAATTGGAATAACCATGCATAAAAAGACTCCCCTTGTAGCAATTGCAACCCCAAGGCAATAA 852 0.4014 MEFTELLGTFVIGDFVPWLDWLTRVSGVYSRAYKVASQFDNFLDQVLDEHINRQKETRSIENVSSDTKSHTDYDFADVLLTLQGTDRTVMKALLLDVFAGGTDTVSTMVEWAMTELIRHPTVMKKVQDEMRNVVGEAKYITEENLAHMKYLKAMIKENLRLHPPIPLLVPRESMQDVKLEGYNIACGTRIIVNAWAIARDPAYWDQPEEFKPERFLNSSIDVKGNDFQLIPFGAGRRGCPGIVFAIAVNELVLANLLHQFDWKTIGITMHKKTPLVAIATPRQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211683g00001 283 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 232 241 IPR017972 GO:0005506|GO:0016705
Stsc211683g00001 283 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS E-class P450 group I signature 193 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS E-class P450 group I signature 89 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS E-class P450 group I signature 109 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS E-class P450 group I signature 229 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS E-class P450 group I signature 239 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 Pfam Cytochrome P450 17 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS P450 superfamily signature 100 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 PRINTS P450 superfamily signature 230 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 SUPERFAMILY Cytochrome P450 2 282 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 Gene3D Cytochrome P450 1 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211683g00001 283 FunFam Predicted protein 98 278 - -
Stsc211683g00001 283 PANTHER CYTOCHROME P450 71B11-RELATED 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211683g00001 Stsc-Chr211683 1079 2188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211683g00001 3 280 Cytochrome P450 AT3G48270 44.000 1.64e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211683g00001 - - aprc:113866669 354.755