LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc211681g00010	ATGAACACAGTAAGCCAAGGTGGAGACTCAAAGCGGAGACGTGATGAGGAGGGAGGTATCTGTATGTACGGAAATCATGTGAAGCTGAACTTGGAAACGGACATCGTGCCGGCGCTCACAAAAACGATTCGGAAAGTGTTAGCTGAGAAGTTGGAGCACACATTTTCTGAGGTACCCGCTGGCGTCCTCTTGGAACTCAGACAATCACTACCTTCAGGCGCAACTGCAGGGACTTCATCTAGGGCGTGGAAACCCTATAAGTTGGTTTTCAAGGATGATTTGGCTGATACAATTTATAGAGACTCCAAGATCAAAGCGAGAGAAGAAGAAGATGTTGAGATTGCTCTATATGATACTATTACTAATTCAATAGTAACAGATGGCTTACTGTCTTCCATTAAGGTCAGGATTTGTGCCCTCAAAGGCGAGTTCAATAATGGCAGCAGCTGGAGCACAACCGAATTCAAGAACAACATCTTTCACCAAAGAGAAGATAAAGCGGCGTTACTAAAAGGAGAAACGATTATTACCTTAAAGAAAGGAGTTGGTCGCATCAGCAACATCTCCTTCACCGATAATTCAAAGCGTACAAGAAGCGGACGCTACAGATTAGGAGCCATTGTTCACTCTCCTGCTTTCTATCAAGAGCACGTCACAGAAGCTGTGACCAATCCTTTTATGGTCAAAGAAAGCAGAGGGAACAAGAAGCATTACCCTCCATCGCCTAAGGACGACATATGGCGATTGGTAAACATATCAAAAGATGGAAACATCCATAAGCGCCTCTCCCAGGACCTTCAAATCAAAACTGTTGAGGATCTCTTGCGCTTTGACAACCAGGCCCATCTAACTTTGTTGCAAAAGGCATTTGGCCAGAGTTCAAGAAAGCTACGTGAAACAATTAAGCATGCTAGGAGTTGTTATCTTCCGACGGCAGTTACATGTCAAGGACAAAATTGTCATTCACACAATATTCTCAACTCCTATCATCATGATGATAAGCAGCATGTTGAGGAGACAGTGACAATGGCTCACACCTTTCCAGGCCCAATGGGAATTCTACAACAGCAAGGGACGGATTTTGTGCAACCTTCTGCCTCAACCCCTCAAGTTGATTCGGCACAAGAACTGTTTGTGTTACCTGAAACAACGCGCATACAAGGGCATAATTATGTAGCTGATGGCAATTGGGATTTTTCTGGGTTCATATGA	1212	0.4414	MNTVSQGGDSKRRRDEEGGICMYGNHVKLNLETDIVPALTKTIRKVLAEKLEHTFSEVPAGVLLELRQSLPSGATAGTSSRAWKPYKLVFKDDLADTIYRDSKIKAREEEDVEIALYDTITNSIVTDGLLSSIKVRICALKGEFNNGSSWSTTEFKNNIFHQREDKAALLKGETIITLKKGVGRISNISFTDNSKRTRSGRYRLGAIVHSPAFYQEHVTEAVTNPFMVKESRGNKKHYPPSPKDDIWRLVNISKDGNIHKRLSQDLQIKTVEDLLRFDNQAHLTLLQKAFGQSSRKLRETIKHARSCYLPTAVTCQGQNCHSHNILNSYHHDDKQHVEETVTMAHTFPGPMGILQQQGTDFVQPSASTPQVDSAQELFVLPETTRIQGHNYVADGNWDFSGFI	403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc211681g00010	403	PANTHER	OS02G0177800 PROTEIN	32	335	IPR012416	GO:0005516
	Stsc211681g00010	403	Pfam	Calmodulin binding protein-like N-terminal domain	86	230	IPR046831	-
	Stsc211681g00010	403	Pfam	Calmodulin binding protein central domain	242	307	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc211681g00010	Stsc-Chr211681	58124	61259	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc211681g00010	6	313	Calmodulin-binding Proteins	AT5G62570	34.385	1.08e-43	154

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc211681g00010	-		-	aip:107645946	478.018